KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_35298
Entry
COCSUDRAFT_35298  CDS       T02914                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03030  DNA replication
csl03410  Base excision repair
csl03420  Nucleotide excision repair
csl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCSUDRAFT_35298
   03410 Base excision repair
    COCSUDRAFT_35298
   03420 Nucleotide excision repair
    COCSUDRAFT_35298
   03430 Mismatch repair
    COCSUDRAFT_35298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csl03032]
    COCSUDRAFT_35298
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_35298
DNA replication proteins [BR:csl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    COCSUDRAFT_35298
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     COCSUDRAFT_35298
   MMR (mismatch excision repair)
    Other MMR factors
     COCSUDRAFT_35298
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    COCSUDRAFT_35298
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Rad9 Hus1
Other DBs
NCBI-GeneID: 17044956
NCBI-ProteinID: XP_005651491
JGI: 35298
UniProt: I0Z8H8
LinkDB
AA seq 264 aa
MFEARLDQAVLLKKLLEAMKDLVNDANFECSPSALSLQAMDTSHVALVAMQLRSDGFAHF
RCDRNLSMGMNLNNMSKCLKCAANDDIITLKAEDTGDSLTFLFESVNQERHSDFELKLMD
IDSEQLGIPDTEYSATVKMPSGEFQRIAKDLGTIGDTVLMSVTKDGIKFSSSGDIGSANI
TVRQNTNVKDQEDATVIDLQQPVSLSFALKYINSFAKATPLSPQVILRLSKDLPLVVEYR
IQDMGHLSFYLAPKVDDEDEMGEE
NT seq 795 nt   +upstreamnt  +downstreamnt
atgtttgaggcacgccttgatcaagcagttttgctgaaaaagcttctggaggctatgaag
gacctggtgaatgatgcaaatttcgagtgcagtccttctgctctgagcttgcaagctatg
gacacatcccatgtggctttggtggccatgcagctgcgatctgatggatttgcacacttc
cgctgtgatcggaacctcagcatgggcatgaatctgaataacatgagcaagtgcctcaaa
tgtgctgcaaacgatgacatcatcaccttgaaggcagaagacacaggagactccctcacg
ttcctctttgagtctgtgaaccaggagaggcacagcgacttcgagctgaagctcatggac
attgacagcgagcagctgggcattccagacacagagtactcagcaactgtgaagatgccc
tctggcgagttccagcggatagcaaaggacttgggcaccatcggggacacggtactcatg
tcagtgacaaaggacggcatcaagttctccagcagcggggacattggcagcgccaacatc
actgttaggcagaacacgaatgtgaaggaccaggaggatgcgacggtgatagacctgcag
cagccggtctcgctcagtttcgcgctcaagtacatcaactcctttgccaaggccactcca
ctctccccgcaggtcattctgcggctgtccaaggacttgcccttggtggtggagtaccgg
atacaggatatgggtcatctcagtttctacctggctccaaaagtggacgatgaggatgag
atgggtgaggagtaa

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