Coccomyxa subellipsoidea: COCSUDRAFT_35311
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Entry
COCSUDRAFT_35311 CDS
T02914
Name
(RefSeq) tetrapyrrole methylase family protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_35311
Enzymes [BR:
csl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
COCSUDRAFT_35311
Ribosome biogenesis [BR:
csl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
COCSUDRAFT_35311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-GeneID:
17044989
NCBI-ProteinID:
XP_005651524
JGI:
35311
UniProt:
I0Z8L1
LinkDB
All DBs
AA seq
344 aa
AA seq
DB search
MQALRPRNLTMLPQRRLLTHHHCNDASEVPENIADEAPPEQSEDIRGPRQGRDVLAAIRQ
PAALDPGLYIVATPIGNLEDVTLRALRVLRDADCILAEDTRHSRKLLSYFSISTQLYSFH
EHNEHVKEAQVLERLAQGASIALISDAGMPAVSDPGAKLIAAAVHARHSVIPVPGPSAVL
ASLVASGLPTESFQFVGFLPPKASQRQKRLSQLAGVEATLIFYAPPHSLAAILDDMAATL
GGSRRCVVAREMTKLHEEFSRGSLEGVASEMRLRGCKGEVTVVVEGSSGSEALAPSDAQI
EAQLRELISDGVPASHAAKLAAKQLGVPRSSLYETAVRIKGETG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctcttcgccctcgcaacctcacgatgttgcctcaacggagattactcacccat
caccactgcaatgatgcttctgaggtgccggagaacattgcagatgaggcgcctccagag
cagtcagaggacatcagagggccacggcagggcagggatgtgctggcagcgatccggcag
cctgcagctttggacccggggctctacatcgtggcgaccccgatcgggaacctggaagat
gtcacgctgcgtgcgctgagagtgctgcgagatgcagactgcattctggcggaagacacg
cggcacagccgcaagctgctgtcctacttcagcatctccacccagctctacagcttccac
gagcacaacgagcacgtcaaggaggcccaggtactagagcggttggcgcaaggggcgtca
atagcgctgatcagcgacgcaggcatgccagctgtcagtgacccgggggcgaaactcata
gccgctgcagtgcatgcgcgccactcagtcatccctgttccaggtccatcggcagtgctg
gcctcgctggtggcctctgggctgcctacagaatccttccaattcgtgggcttccttcca
ccgaaggcctcacagcggcagaagaggctgtcgcagcttgcaggcgtggaagctactcta
atattctatgcgcccccgcactcactggcggccatcctcgatgacatggctgcaaccctg
gggggctcgcgcagatgcgttgtagccagggaaatgacgaagttgcatgaggagttttcc
aggggctcgctggagggtgtggctagcgagatgcgcttgcgaggctgcaagggagaggtg
actgttgtggtggagggatcatcgggtagtgaggcactggcgccgtcagatgcgcagata
gaggcgcagctgcgggagctgatatctgatggcgtgcctgcctcccacgcagccaagctg
gcagccaagcagctgggtgtgccgcgaagttctttgtacgagactgctgtgcgtattaag
ggcgagacgggatga
DBGET
integrated database retrieval system
