Coccomyxa subellipsoidea: COCSUDRAFT_35728
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Entry
COCSUDRAFT_35728 CDS
T02914
Name
(RefSeq) tRNA synthetase class I (C) family protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCSUDRAFT_35728
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csl01007
]
COCSUDRAFT_35728
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_35728
Enzymes [BR:
csl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
COCSUDRAFT_35728
Amino acid related enzymes [BR:
csl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
COCSUDRAFT_35728
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COCSUDRAFT_35728
Prokaryotic type
COCSUDRAFT_35728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1f
tRNA-synt_1
CheZ
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
17043294
NCBI-ProteinID:
XP_005649836
JGI:
35728
UniProt:
I0Z3S3
LinkDB
All DBs
AA seq
536 aa
AA seq
DB search
MGCPAGLQSSCPEAKLSSTTSDDALQEHPKDLWLHNTMSGRKELFQPRPGQGNKVSMYCC
GVTVYDYSHVGHARVYCAFDVLFRYLRHLGYEVDYVRNFTDIDDKIIKRASETGEDPLQL
SQRFIHEFHTDMDALNCLAPTSEPKATDFISQMVDMIGRIVKAGHGYEADGSVWFSVESV
PGYGRLSGRSLDDNRAGERVAVNTTKRNPADFVLWKAAKVGEPKWDSPWGPGRPGWHIEC
SAMIRELMGPIIDIHGGGRDLIHPHHDNELVQSQAAACECDRENMLDHRDFVRWWMHLGF
VNVDSEKMSKSLGNFFTIRDVLQMYHPMALRWFLINTQYRQAINYTERSLQEASDRLYYI
YQTLQDAEAALTAAAAAGEQVSVATEQHSNGTKLLKSVEASLCDDLNTPQAFAALSEPLK
TMNDLLHTKKGKKAGGRLQTIATLQQALNSVLELLGLGAGDIGAVLVEMRQRALHRAGLK
EQDVELSIERRAVARAAKDYASADKERAFLAERGIMIMDGSEGTLWRPGIPDSQSN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcccagctgggctgcagagcagctgcccagaggccaaactgtcatcaaccacc
tcagatgatgcactgcaagagcaccccaaagatctctggctgcacaacacgatgtcaggc
aggaaggagctttttcagccacggccaggccagggcaacaaagtcagcatgtactgctgc
ggtgtcactgtgtatgattacagtcatgtcggtcatgctcgcgtctactgcgcatttgat
gtgctcttccggtacctccgacaccttggctatgaggtcgattacgtccgaaacttcact
gacatcgatgataaaatcatcaagagagcttcagaaacaggagaggatcctttgcagctg
agccagaggttcatacacgaatttcacacggacatggacgccttgaattgcctagcgccc
accagcgagccaaaggcgaccgacttcatctctcagatggtggacatgattgggcgcatt
gtcaaagccgggcatggctatgaggctgatgggagcgtgtggttttccgtcgaaagtgtg
cctggctatggccgcctatcggggcgctctttggatgacaatcgagcgggagagcgcgtc
gctgtaaatacgacaaagcggaatccagcagactttgtcctgtggaaagcagcgaaagtg
ggagagccgaaatgggacagcccctgggggccaggccgcccagggtggcacatcgaatgc
agcgccatgatacgtgaactcatggggcccatcatcgacatccacgggggcggcagggac
ctcattcatccacaccatgacaatgagctggtccagtcacaggctgctgcctgcgaatgt
gatagagagaacatgcttgaccatcgcgacttcgtgcggtggtggatgcacctcggcttc
gtcaatgtggacagcgagaaaatgtccaagtcattgggaaatttctttacaatccgggat
gtcctgcaaatgtaccatccaatggcgctgcgatggtttctgatcaatacacagtaccgc
caagccataaactacacagaacgcagccttcaggaggcatcggaccggctctattacatc
taccagaccctgcaggatgcagaagctgccctgacagcagctgctgcagctggggaacag
gtgtctgtggcaacagaacagcacagtaacggcacaaagctactcaagtcagtggaagcc
agtctatgcgatgatttgaacacaccacaggcatttgcagccctgtcagagccactcaaa
acaatgaatgaccttctccataccaagaaggggaagaaggctggaggcagactgcagaca
atagcaactttacaacaggccctgaactccgtgttggagcttttgggacttggcgctgga
gatattggagctgtcttggtggaaatgcgccagcgggcgctccacagggctgggttgaag
gagcaggatgtcgagttgagtatagagaggcgagcagtcgccagggcggcaaaggactat
gcatcagcagacaaggaacgagctttccttgctgagcgggggatcatgatcatggatgga
tctgaaggcacgctgtggcggccgggcatcccagactctcaaagtaattaa
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