Coccomyxa subellipsoidea: COCSUDRAFT_35786
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Entry
COCSUDRAFT_35786 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00260
Glycine, serine and threonine metabolism
csl00400
Phenylalanine, tyrosine and tryptophan biosynthesis
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
csl01230
Biosynthesis of amino acids
Module
csl_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
COCSUDRAFT_35786
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
COCSUDRAFT_35786
Enzymes [BR:
csl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
COCSUDRAFT_35786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
NanE
PcrB
Spore_YtrH
Motif
Other DBs
NCBI-GeneID:
17043412
NCBI-ProteinID:
XP_005649954
JGI:
35786
UniProt:
I0Z441
LinkDB
All DBs
AA seq
268 aa
AA seq
DB search
MAVDTTSVSGRMAELREQKRGAFIPFITAGDPDIETTEQALLALDRAGADIIELGVPYSD
PLADGPTIQAASTRALASGTTLKKVIDVVGKVSPHITAPIVLFTYYNIIMRRGPEKFCQE
IKAAGAAGLLVPDIPLEETGPIREVATAAGLELVLLTTPTTPQPRMEAIAKASQGFVYLV
SVTGVTGQRVSMESRVEGLIEQLHQITDKSVAVGFGVSGPEQARQIMAWGSEGVIVGSAL
VKALGEAPSAKEGLERMEALARSIREAI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgacactacttcagtaagcgggcgaatggctgagctgcgtgaacagaaaagg
ggagcattcatcccgttcataactgctggagacccagatattgaaacaacagagcaggct
cttctagcgcttgacagagctggagctgatattatagagctgggagtgccctactcggat
ccgcttgcagatgggcctacaatccaggcggccagcacacgcgcattggctagcggcacc
acacttaagaaggtcatagacgtggtgggcaaagtgtcgcctcacatcaccgcgcccatc
gtactgttcacatactacaacatcatcatgaggcgcggccctgagaagttttgccaggag
atcaaggctgccggggccgcaggtctgctggtgccggacatccccttggaggagacaggg
ccgatccgggaggtggccacggcggcaggactggagctggtgctgctgacaacgcccacc
actccccagccgcgcatggaagccatagccaaggcctcccagggctttgtctatcttgtg
tcagtgacaggtgtgactggacagcgggtatccatggaatcgcgcgtggagggcttgatc
gagcagttgcatcagatcacagacaagtcggtggctgtgggctttggcgtttcaggccca
gagcaggctcggcaaatcatggcatggggctcggagggtgtcattgtcgggagcgctttg
gtgaaggctcttggagaagcgcccagtgccaaggaaggcttggaacggatggaagcactt
gcgcgcagcatcagagaagccatttga
DBGET
integrated database retrieval system