Coccomyxa subellipsoidea: COCSUDRAFT_35877
Help
Entry
COCSUDRAFT_35877 CDS
T02914
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_35877
Enzymes [BR:
csl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
COCSUDRAFT_35877
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
COCSUDRAFT_35877
Prokaryotic type
COCSUDRAFT_35877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
17043575
NCBI-ProteinID:
XP_005650117
JGI:
35877
UniProt:
I0Z4K4
LinkDB
All DBs
AA seq
447 aa
AA seq
DB search
MSRDQRVQDNWALLHAAEVAAKSHAPVAVVFNLVPSYLNAGARQFGFMLRGLKLMQPKLE
ALNIPFFLLKGDPVQTVPELVQRTGASLLVTDFAPLRLGRQWRDQVAEKLSVPFHEVDAH
NVVPCWEASDKREYGARTIRPKIHRQLPEFLQPYPDLGKQPKWELDVKPDAVDWDAEIAA
VVERGKDVPEVDWVKPGEDAAMEALLGEKGFLSKERLSIYNTKRNNPNFPKALSQLSPFL
HFGHLSAQRAALEASKLRSKFKEGVEAFNEECVVRRELSDNYCFYTPNYDTLDACYPWAR
ETLQKHTADKREFIYTREELEEGKTHDLLWNAAQLEMVHHGKMHGFMRMYWAKKILEWTN
SPEEALEIAIVLNDKYEIDGRDPNGYVGCMWSIGGIHDQGWGERPVFGKIRYMNAKGCQR
KFDCKAYIKLIDDMMAKVKAQQERKSR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgatcaacgtgtgcaggacaactgggcactcctgcatgcagcagaagttgct
gccaagagtcatgccccggtcgctgtggtcttcaaccttgtcccatcgtacctgaacgcc
ggtgcccgccagttcggcttcatgctgcggggcctgaagctgatgcagcccaagctggag
gccctcaacatccccttcttcctcctcaagggggaccctgtgcagacggtgccagagctc
gtacagaggaccggtgccagcctgcttgtcaccgactttgctcccctccgccttggcagg
cagtggcgcgaccaggtggcggagaaattgagcgttcccttccacgaggtggacgcacac
aacgtggtgccctgctgggaagccagcgacaagcgggagtatggggcgcgcacaatccgc
cccaaaatccacaggcagctgccagaattcctgcagccgtacccagacttgggcaagcag
cccaagtgggagctggacgtgaagccggatgcagtggactgggatgcagagatcgcagct
gtggtggagaggggaaaagatgtcccagaggttgactgggtcaaacccggcgaagatgct
gccatggaggcgcttcttggggagaaggggttcttgtcaaaggagcggctgtccatctac
aacaccaagcgcaacaatcccaacttccccaaagcactgtctcagctgtccccgttcctg
cactttggccacctgtccgcccagcgcgctgcactggaagcttccaagctccgcagcaag
ttcaaggagggtgtggaggcattcaatgaggagtgcgtggtgcggcgggagctgtctgac
aactactgcttctacacgcccaactatgacaccctggacgcctgctacccctgggccagg
gagactctgcagaagcacaccgcagacaagcgagaattcatctacacccgggaggaatta
gaggagggcaagacacatgacctgctgtggaatgcggcgcagctggagatggtgcatcac
ggcaaaatgcacggcttcatgcgcatgtactgggccaagaagatcttggaatggaccaac
agccccgaggaggcgcttgagattgctattgtgctgaatgacaagtatgagatcgacggg
cgcgacccaaacggctatgtgggctgcatgtggagcattggaggcatccatgatcagggc
tggggagagaggccggtgtttggcaagatccgctacatgaacgccaaggggtgccagcgc
aaattcgactgcaaggcctatatcaagctcattgatgacatgatggccaaggtcaaggcg
cagcaggagagaaaaagccgttga
DBGET
integrated database retrieval system
