Coccomyxa subellipsoidea: COCSUDRAFT_38257
Help
Entry
COCSUDRAFT_38257 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl02010
ABC transporters
csl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
COCSUDRAFT_38257
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
COCSUDRAFT_38257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_38257
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csl02000
]
COCSUDRAFT_38257
Membrane trafficking [BR:
csl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
COCSUDRAFT_38257
Transporters [BR:
csl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
COCSUDRAFT_38257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA_25
DUF4807
nSTAND1
Motif
Other DBs
NCBI-GeneID:
17037362
NCBI-ProteinID:
XP_005643966
JGI:
38257
UniProt:
I0YM03
LinkDB
All DBs
AA seq
585 aa
AA seq
DB search
MASYTLQIVLHLLLLVHLFLRGAAAALGQALIPYYTGVIIDCASIDPDFKEFQWTCLKLV
IVSLGCAVFTGIRGGLFTIGMTRLNVRIRTSLFDSLMRQEISFFSSTRTGEITSRLSADT
TTVSDQICLNMNVGLRSLTQAAMVLVFMFRASWRLSVITFIIIPAIILITKVYGAYYREL
AKAVQKELADANSVAEEALSSMTTVRAHAAENSAKAAYQECLRKFYTLQLKEALAYGTYM
ICTTFLPNAVNVVTLYYGGNLVLDGMMSAGALVSFMLYVASLNGAFQALGDVFSAFAAAL
GAADKVIELIQREPQLPDAGSLQPPSFSGRLELQDVSFSYPSRPDSRVLDSISLRVNPGE
VVALVGPSGGGKTSIVKLVERFYLPDAGAVLLDGLEVGAYDPRWLKRRVALVAQEPVLFA
RSVRRNICYGLEAEDGVHPRDIPSAADVERAARLANAHDFISAMPQGYDTDCGEKGVSLS
GGQKQRIAIARALVRNPTVLLLDEATSALDSDSEAVVQEALDRMMRNHTVLVIAHRLSTV
AGADRILVIQGGSVAEEGTHESLAEAGGLYSALGMLHPTKPPKSI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttacactttgcaaattgttcttcatctgcttttgctggtgcacctgtttctg
aggggggcggcggcagcgctcgggcaggcgctgatcccgtactacacaggggtgatcata
gactgcgcgtccattgatccggacttcaaggagttccagtggacctgcctgaagctggtg
atcgtgtcgctgggctgcgcggtcttcacgggcatcaggggcggcctgttcaccataggc
atgacgcggctgaacgtgcggatacgcactagcctgttcgactccctgatgcggcaggag
atctctttcttcagttccacgcggacaggtgagatcaccagccggctgtcggcagacaca
acaacggtgtcggaccagatctgcctcaacatgaacgtgggcctgcgcagcctgacacag
gcggccatggtgctggtgttcatgttccgagcctcctggcgcctctcagtcatcacattt
atcattatccccgccatcatcctcatcaccaaagtctacggcgcctactacagggagctg
gcaaaagcggtgcagaaggagctggcggatgccaattcagtggctgaggaggcgctgtca
tccatgactactgtgcgcgcgcatgctgccgagaactctgccaaggcggcctaccaggaa
tgcctgcggaaattctacacgctgcagttgaaggaggccctggcttatgggacctacatg
atctgcaccacgttcttgcccaatgcggtcaatgtggtgacgctgtactacggtgggaat
ctggtgcttgatggaatgatgtcagctggggctctcgtctccttcatgctgtatgtggcc
tccttgaatggagcctttcaggcactgggggacgtcttttcggcgtttgcggcagcgctc
ggggcggcggacaaggtgatagagctgatacagcgcgagccgcagttaccggacgcgggc
agcctgcagccgccgtccttctctggccgcctggagctgcaggacgtgagcttcagctac
ccctcgcgaccagactcgcgcgtcctagactccatctccctgcgggtcaaccccggcgag
gtggtggcgttggtggggccgtcgggcgggggcaagacatcgatagtgaagctggtggag
cgcttctatctgccggacgcgggcgccgtactgctggacggcctcgaagtgggcgcctac
gacccccgctggctcaagcgcagggtcgccctcgtagcccaggagccggtgctgtttgcg
cgcagcgtgcggcgcaacatctgctacgggctggaggcggaggacggcgtgcacccgagg
gacatcccttcggctgctgacgtggagcgcgcggcgcggctggccaatgcgcatgacttc
atctccgccatgccccagggctacgacaccgattgtggggagaagggagtgtctctgtcg
ggagggcagaagcagcgcattgccattgcaagggcgctggttcgcaacccgacagttcta
cttctggacgaggcgacgagcgcgttggattctgacagtgaagcggtggtgcaagaggcg
ctggaccgtatgatgaggaatcacaccgtgctagtcattgcccaccgtctctccacagtc
gcaggcgccgaccgcatcctggtgattcaagggggctcagtggcagaggagggaacgcat
gaaagcctggcagaggctggaggcctctattcagcactgggcatgttgcatcctacaaag
cccccaaaaagtatctga
DBGET
integrated database retrieval system
