Coccomyxa subellipsoidea: COCSUDRAFT_38458
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Entry
COCSUDRAFT_38458 CDS
T02914
Name
(RefSeq) putative valyl tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCSUDRAFT_38458
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csl01007
]
COCSUDRAFT_38458
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_38458
Enzymes [BR:
csl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
COCSUDRAFT_38458
Amino acid related enzymes [BR:
csl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
COCSUDRAFT_38458
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COCSUDRAFT_38458
Prokaryotic type
COCSUDRAFT_38458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
17036873
NCBI-ProteinID:
XP_005643467
JGI:
38458
UniProt:
I0YKK4
LinkDB
All DBs
AA seq
1005 aa
AA seq
DB search
MIDAARATPKGQKKDYAAEMPKGYDPKFVEAATYAWWEDCGYFKPNDKSDAEPFVIVIPP
PNVTGSLHLGHALMVAVEDTLTRWHRMSGRNALWVPGTDHAGIATQTVVEKQLQREQGIT
RHDLGREAFVGEVYKWVDTYGGKILAQLRRMGASPDWSRLAFTMDDKLSAAVLEAFLRLH
KEGLIYRDNRLVNWCTRLKTAVSDIEVDYIDIAENTELAVPGYDEKVMFGVLTSFAYPLE
DGAGEIVVATTRPETMLGDTAVAVHPDDPRYAHLHGKHVVHPLDGRKIPIITDAELVDIS
FGTGAVKITPAHDPNDFATGKRHALDFINILTNDGAINERGGQFAGQPRFQARKTVVDWL
KEKGLYRGEAGNAMRLGLCSRSKDVIEPVLKPQWWVSCKGMADDACAAVRDGRISILPDE
FKATWFRWLENIRDWCISRQLWFGHRIPAYYVTLEGEGDAAPPGTMDERMDRWVVARDAE
SARKVAEERFPGKVQNLVQDDDVLDTWFSSGLFPFSVFGWPEQTPDLAKYYPTTLLETGH
DILFFWVARMVMMGMKLTGEVPFKQIYLHSMVRDAHGRKMSKSLGNVIDPLHVIEGISLE
GLYSTLGGGNLEKNEMERAKQGQKADFPEGIEECGTDALRFTLLSYTSQALSVNLDIKRV
VANRYWCNKLWNAVKFALERLGDDFRPSPQLPAAAQLPLPCRWILSRLNAATQKVVTGFE
TYSFADGTQALYGWWQYDLCDVFVELVKPVIPRPGAEAEAAGAETAAPAAFTSSPEGQQA
YKDTLWLCLDTGLRLLHPFMPFVTEELWQRLPGRRDQSGGFASIMIAPFPAAQPSWADPT
GEDEVALILDVVRAARSLRSDYDLKTKQRQALHIACKVASSADVLRRCSELIGTLALSDT
VKVLQEGEEAPKGCGVYVVNDAMTVCLDLEGIVDPQKEAEKLQAKQAKLAEQIEVLNTKR
SMSDYEEKTPEDIRRADAEKLKSLADEEAMLQQHLKSMLERAQQR
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgcggcacgggcaacgcccaagggccagaagaaggactacgctgcagagatg
cccaagggctacgaccccaaattcgtggaagctgctacatatgcttggtgggaggactgc
ggctacttcaagccgaatgacaagagcgatgcagagccatttgtgatcgttatcccaccc
cccaatgtgacgggctcgttgcaccttggccatgctctcatggtcgccgtagaggataca
ctgacgcggtggcatcgcatgagcgggcgcaacgctctgtgggtacctggaacagaccat
gcaggcattgccacgcagaccgtggtcgagaagcagctgcagcgggagcagggcatcaca
cgccacgacctggggcgggaagcgtttgtgggggaggtgtacaagtgggtggacacttac
ggaggcaagatcctggcgcagctgcggcgtatgggggcctcgccggactggtcccgcctg
gcattcaccatggacgacaagctgagcgcggccgtgctggaagcattcctgcggctgcac
aaggagggcctcatctaccgcgacaaccgcctggtcaactggtgcacccgcctcaagacc
gccgtctccgacatcgaggtggactacatcgacattgccgagaacaccgagctggcggtg
ccggggtatgacgagaaggtgatgtttggcgtgctcacctcgtttgcatatccgctggag
gacggcgctggcgagatcgtggtggccacaacgcggccggagaccatgctcggcgacacg
gccgtggctgtgcacccagatgacccacggtacgcgcacctccacggcaagcacgtggtg
cacccattggacgggcgcaagatccccatcatcaccgacgcggagttggtggacatatcc
tttgggacgggcgcggtcaagatcacacccgcgcacgaccccaacgatttcgccactggc
aagcgccacgccctcgacttcatcaacatccttaccaacgacggcgccatcaacgagcgc
ggcggccagtttgccggccaaccccgcttccaggcgaggaagacggtggtggactggctg
aaggagaaggggctgtaccgtggggaggcgggcaacgcgatgcgactgggcctgtgcagc
cgcagcaaggacgtgatagagccggtgctcaagccgcagtggtgggtgtcctgcaagggc
atggccgacgatgcctgtgccgccgtgcgcgacggccgcatctcaatcctacccgacgag
ttcaaggccacctggttcaggtggctggagaacatccgtgactggtgcatcagccggcag
ctgtggtttggccaccgaatccccgcctactacgtgacccttgagggcgagggagatgca
gcgcccccaggcaccatggacgagcgcatggacaggtgggtggtggcgcgcgatgccgag
tcagccaggaaggtcgctgaagagcgcttccctggaaaggtccagaacctggtgcaggac
gatgatgtgttggacacctggttttcctcgggcctgttccccttctcggtgtttggctgg
ccggagcagacgcctgatctggccaagtactacccgacaacgctgctggagacggggcac
gacatcctcttcttctgggtcgcccgcatggtcatgatgggcatgaaactcaccggggag
gtgccattcaagcagatctacctgcacagcatggtgagggacgcgcacggccgcaagatg
tccaagtccctgggaaatgtcatcgaccccctccatgtcatcgagggcatctcactagag
gggctgtactccacgctgggggggggcaacctggagaagaatgagatggagagggcgaag
cagggccagaaggcggacttccctgagggcatcgaggagtgcggcaccgacgccctgcgc
ttcaccctcctctcctacacctcgcaggcgctgagcgtgaacctggacataaagcgcgtg
gtggccaaccgctactggtgcaacaagctctggaacgccgtcaaattcgcgctcgagcgc
ctcggcgacgatttccggccctcgccgcagctgccagccgccgcgcagctgccgctgccc
tgccgatggatcctctcccgcctcaacgccgccacgcagaaagtggtcaccggctttgag
acctacagcttcgcagacggcacccaggcgctgtacggctggtggcagtacgacctgtgc
gacgtgttcgtagagctggtgaagccggtgatcccacggccgggcgcggaagccgaggcc
gcgggcgcggagacggccgccccggccgcatttaccagcagcccagaagggcagcaagcc
tacaaggacaccctctggctctgtctagacaccggcctcaggttgctgcatccattcatg
ccgtttgtgacggaggagctgtggcagcggctgccggggcgacgggatcagtcaggcggc
tttgcctccatcatgatagcgccgttcccggccgcgcagccgtcctgggccgaccccacc
ggagaggacgaggtcgccctcatcctggacgtcgtcagggccgcgcgcagcctgcggtca
gactacgacctgaaaacgaagcagaggcaggcgctgcacattgcatgcaaggtggcctcc
agcgcggacgtgctgcggagatgctctgagctcataggcaccctggcgctctcagacaca
gtcaaggtgttgcaggagggggaggaggctcccaaggggtgtggagtgtatgtggtgaat
gatgccatgacggtgtgcttggacttggaaggcattgtggacccacagaaggaggcagag
aagctgcaggccaagcaggccaagctggcagagcagatcgaggtgctgaacacgaagcga
agcatgagcgattatgaggagaagacgccagaggacatcaggagagcggacgccgagaag
ctgaagagcctggcggacgaggaagccatgctgcagcagcacctcaaaagcatgctggaa
cgggcgcagcagcgctga
DBGET
integrated database retrieval system
