KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_38697
Entry
COCSUDRAFT_38697  CDS       T02914                                 
Name
(RefSeq) RBP11-like subunits of RNA polymerase
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03020  RNA polymerase
csl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    COCSUDRAFT_38697
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCSUDRAFT_38697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csl03021]
    COCSUDRAFT_38697
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_38697
Transcription machinery [BR:csl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     COCSUDRAFT_38697
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      COCSUDRAFT_38697
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L DUF1178
Other DBs
NCBI-GeneID: 17036162
NCBI-ProteinID: XP_005642799
JGI: 38697
UniProt: I0YIN6
LinkDB
AA seq 122 aa
MNAPDRFERFVVPDGVPKISLEKDTKVTNAATFTLQREDHTVGNLVRMQLLRDKEVTFAG
YKFPHPLDYHILIKVQTKGKKSPREVMDDALTDLCDEFEDIRAKFQAEARRIHSSEAGPM
YA
NT seq 369 nt   +upstreamnt  +downstreamnt
atgaacgcaccagatagatttgagcgctttgtcgtaccggatggcgtaccaaagatatcc
ttggagaaagatacaaaggtgacaaatgcggcaactttcacactgcagagagaggatcat
accgtgggaaacctcgtccgcatgcaactgctcagggataaggaggtgacctttgctgga
tacaagttcccacacccactggactatcacatactgataaaggtgcagaccaagggcaag
aagagtcctcgagaggtgatggatgatgctctgacagacctgtgcgacgaatttgaagac
atccgagccaagtttcaggcggaagctcgcaggatacacagcagcgaagcaggccctatg
tacgcctga

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