Coccomyxa subellipsoidea: COCSUDRAFT_38827
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Entry
COCSUDRAFT_38827 CDS
T02914
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_38827
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
COCSUDRAFT_38827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
CCDC113_CCDC96_CC
Fez1
DUF8031
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
17045068
NCBI-ProteinID:
XP_005651597
JGI:
38827
UniProt:
I0Z8T4
LinkDB
All DBs
AA seq
1074 aa
AA seq
DB search
MLFWDCLQLMQQELGHLLASVRRFEKGSIIKIRVKNFMTYDEAVFNPGPRLNLVLAPNGT
GKSSLTCALCLGLAGHPNILARADDQKDFIRKGTNEAMTEITLSSGNPLRPIVIHRRLTR
ESSKYKINGVDKTKADVLKVLKDLNIQLDNLCQFLPQDRVAAFALMKPGQLLMESERAMG
DARLHKLHLELIEDRNTLKTYERTAGALQRRLEEEERHMGELQRDKERYDQRRQLEEQAD
LLEKKNLYMDFQEAQDKLRETNARLVQGRQRLQEIKDEIARDAAPLVAKLAEEGRLKTSV
LSQKRGLIEKQNLAETFMKKSDNLVQQLKQKWDAIDGLKAQAEQQAQQVAKLEADVAKLQ
ADLDELPGESSASTQGSQAAPSEEILALKKQVADLNTEAREFDGNVYELRDQLHTCEQEM
KHWQEQLARLDSVRDNKLRFLEQRNRGITAFAHWVTENKARFKGDVYGPILLEVTVADQQ
HAKYLEQQLPGHIWTRFVTVYREDQDELRREAQRRKVHITTSNYTGSVTAPLQHPDGPAS
QYANFGITHTLDEVFEAPPVIKRILNDESSITRAYVGTARTDVDAFLRANATVTNLYTPE
SNHRIRVSLYNSAARSQQVKAIKQQCDWLGGARDDKDEPASIDKGIRETQQAMDAMKSEM
HALNAGKREAETRVAEKRRELKKLEDAFNTIKRKRLKLVSSLNGKKKLLADVKKKPDPLS
REPGLRRDVDRFNTQCHNLVQKVAVDLKAQWTAMTQHACSEAHLLELQAQIAALRDRNQG
SNDRQRKLENLLVQLQHGKELDLKELKRRKKIANDACELTNEIREQFQALPADRDELRAR
MDDLHRQAAAIQCANPRVMQEYEDRLARIRTLREDVGKETDMLQGLTAALEAKKAQWLPE
LQRMVGVINAQFGRNLRSMGCAGEVSLFCGCEAGFDACNNFDKYAVHIRVRFRDDEELQL
LTANRQSGGERSVCTILYIIALQHVTVCPFRVVDEINQGMDQINERKVFVQMVEAACREG
TPQCFMFTPKLLPDLPYTRDVYPMSIFNGVLAEPLTDNFQEDSFVAGMPVVYKG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctgggactgtctgcagctgatgcaacaggagctgggccacctgctcgccagt
gtgaggcgctttgagaagggcagcatcatcaagatccgcgttaaaaacttcatgacttac
gacgaggcagttttcaaccctgggccgcgtctgaaccttgtgcttgccccaaacggcact
gggaagagctccctcacttgcgctctgtgcctgggcctggctggacacccaaatatcctg
gcgcgcgcagacgaccaaaaggacttcattcgcaagggcacgaatgaggcaatgacggaa
atcactctgtcatccggaaaccccctgcgcccgatcgtcatccaccggcggctcacgcgc
gaaagctccaaatacaaaatcaatggcgtggacaagaccaaagcggatgtgctgaaggtg
ctcaaggacctaaacatccagctggacaacctgtgccagtttctgccccaggatcgggtg
gcggcgtttgcgctgatgaagccggggcagctgctgatggagagcgagcgcgcgatgggc
gacgcgcggctgcacaaactgcacctcgaactcatcgaggaccgtaacactctcaagacc
tacgagcggacggcgggggcgctgcagcggcggttggaggaggaggagaggcacatgggc
gagctgcagcgcgacaaagaacgctacgaccagcgcagacagctcgaggagcaggcggac
ctgctggagaagaagaacctgtacatggacttccaggaggcgcaggacaagctccgggag
accaacgccaggcttgttcagggcaggcagcggctgcaggagatcaaggacgaaatcgcg
cgcgacgcggcgccccttgtggcaaagctggctgaggagggccgtctgaagaccagcgtg
ctgtctcagaagagggggcttatagagaaacagaacctggcggaaaccttcatgaaaaag
tcggacaacctggtgcagcagctgaagcagaagtgggatgccattgatgggctgaaggct
caggcagagcagcaggcgcagcaggttgccaagctggaggctgacgtggcaaagctgcag
gctgacctggacgagctaccgggtgagtcatcggcgtccacacagggcagccaggcggcg
cccagcgaagagatcctggccctcaagaaacaggtcgctgacctcaacaccgaggcgcgc
gaatttgacggcaatgtgtatgagctgcgggaccagctccacacctgcgagcaggagatg
aagcactggcaagagcaacttgcgcggctggactcggtgcgggacaacaagcttcgcttt
ttggagcagcgaaatcgcggaatcactgcgttcgcgcactgggtgaccgagaacaaggcg
cgcttcaagggggatgtctacggacccatcctgttggaggtgaccgtagcggaccagcaa
catgccaagtacctggagcagcagctgcctgggcacatctggacgcggtttgtgactgtg
taccgggaggatcaggacgagctgcggagggaggcgcagcggcgtaaagtacacatcacc
acctccaattacaccggctccgttacggcccctctgcagcaccccgacggccccgcttcc
cagtatgccaactttggcatcacacacacgctggacgaggtgtttgaggcgccaccggtg
atcaagcgtatcctcaacgatgagtcgtccatcacccgcgcctatgtgggcacagcgcgc
acagacgtggatgcattcctgcgcgccaatgccaccgtcacaaacctgtacacgccggag
agcaaccaccgcatccgcgtcagtctctacaactcagccgcgcgcagccagcaggtgaaa
gccatcaagcagcagtgcgactggctgggaggcgcgcgagacgacaaggacgagcccgcg
agtatcgacaaaggcatccgggagacccagcaggcgatggatgccatgaagagcgagatg
catgcgctcaacgctggcaagagagaggcagaaacgagggtggccgagaagaggagggag
ttgaaaaagctggaggacgctttcaacaccatcaagcgcaagcgcctaaagttggtgagc
tcgctgaacggcaagaagaagctgctggcggacgttaaaaagaagccggacccgctgtcg
cgagagccgggcctgcgccgcgacgtcgaccgcttcaacacccagtgccacaacctggtg
cagaaggtggcggtcgatctgaaggcgcagtggacggccatgacgcagcacgcctgcagc
gaggcgcaccttttggagctgcaagcgcagattgcggccctacgtgatcgcaaccagggc
agcaacgaccgccagcggaaattggagaatttgctggtgcagctgcagcacggcaaggaa
ctggacctcaaggaactcaagcggcgcaagaagatagcgaacgatgcgtgcgagctgacg
aacgagataagggagcagttccaggcgctgccggcggatcgagatgagctgcgcgcgcgg
atggacgacctgcaccgccaggcagccgccatccaatgcgccaacccccgcgtaatgcag
gagtatgaggaccggttggcgcgcatccgcacgctgcgagaggacgtgggcaaagagacc
gacatgctccagggcctcaccgccgcactcgaggccaagaaggcgcaatggctgccggag
ctgcagcgcatggtgggggtgataaacgcgcagtttgggcgcaacctgcggtccatgggg
tgtgcgggcgaggtgtcgctcttctgcggctgcgaggccggctttgacgcctgcaacaac
ttcgacaagtacgcggtgcacatccgcgtccgcttcagggacgatgaggagctgcagctg
ctgacggccaatcggcagtccggtggcgagcgctccgtctgcaccattctctacatcatc
gccctgcagcacgtgacggtgtgccccttccgggtggtggacgagatcaaccagggcatg
gaccagatcaacgagcgcaaggtgtttgtgcagatggtggaggctgcgtgccgggagggg
actccccagtgtttcatgttcacgcccaagctgctgccggacctgccctacacgcgcgac
gtctaccccatgtccatcttcaatggagtcctcgctgagccgctcaccgacaacttccag
gaggactcctttgtggcaggcatgccggtggtgtacaagggatag
DBGET
integrated database retrieval system
