KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_38841
Entry
COCSUDRAFT_38841  CDS       T02914                                 
Name
(RefSeq) Metallo-hydrolase/oxidoreductase
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csl03016]
    COCSUDRAFT_38841
Enzymes [BR:csl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     COCSUDRAFT_38841
Transfer RNA biogenesis [BR:csl03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    COCSUDRAFT_38841
 Prokaryotic type
    COCSUDRAFT_38841
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 Anti-Pycsar_Apyc1
Other DBs
NCBI-GeneID: 17045092
NCBI-ProteinID: XP_005651621
JGI: 38841
UniProt: I0Z8V8
LinkDB
AA seq 420 aa
MAVTWLGTSSGAPTLKRNVSCISLRLPHSTFLVDAGEGSCRQLEMAGMDAVRVKKLFITH
MHGDHCFGIGGLLRAVSAAREGTPSADVPFTVYGPPGLHKLVTAALGFDERPLAMPLMVV
ELTVDPAKGHAPRPAGEISHVDQGRVKFATLAPDRTPDAEAALRRAPDQRRRSNRQMSVE
HAVEVIEGLAWTIPCEDGITVTAAQLQHRVPCWGYVFQEAGLPPVPDQALMASAGVDEEA
VREAMRQGPSAPVALPGGQAVPVRSLVRPPRRGRKVVLLGDTCNSRAILRVGQGADLLSH
EATFTADMREKAHIAQHSTAPMAGAFARALGAQTLVLTHFSGRFNDWRGKPGAGEEDALP
SDIQMLRRQAMTAYGSSSIYMAQDFYTHHVPLPVPGAASKRTQAPQGAAKQPQRQQRVAA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggcggtgacgtggctgggcacgtcttcgggggcgcccactctcaagcgcaacgtgtcg
tgcatctctttgcgcctgccgcactccaccttcctcgtggatgccggcgagggctcctgc
agacagctggagatggcgggcatggatgctgtgcgcgtgaagaagctattcataacgcac
atgcacggcgaccactgctttggcatcggcgggctgctgcgcgcggtcagcgcggcacga
gagggcacgccgtcagccgacgtgccctttacggtctacgggcccccgggcctgcacaag
cttgtgaccgccgccctcggctttgatgagaggcccctggccatgcccctgatggtggtg
gaattgacagtggacccggccaaggggcacgcgcccaggccggcaggggagatatcacat
gtggaccaggggcgcgtgaaatttgcgacgctagcacctgatcgcactcctgacgcggag
gcggctctgcggagagcgccggaccagcggcggcgcagcaaccggcagatgtcagtcgaa
cacgctgtggaggtgattgaggggctggcgtggacgattccgtgcgaggacggcatcacg
gtaactgccgcgcagctgcagcacagggtgccctgctggggctacgtcttccaggaagct
ggcctgccccccgtgccagatcaggcgctcatggccagcgctggtgtggacgaggaggcg
gtgagggaggcgatgcggcagggcccatcggcgccggtggcgctgccgggcggccaggcc
gtgccggtgcgctctctcgtgcggccgccgcgccggggccgcaaggtcgtgctgctcggc
gacacctgcaactcgcgtgcaatcctcagggttggccagggggcggatctgctgtcgcac
gaggccacattcacggcagacatgcgcgaaaaggcccacatagcgcagcacagcacggca
cccatggcgggggctttcgcgcgcgcgctcggtgcgcagacccttgtgctgacccacttc
agcggccgcttcaacgactggcgcggcaaacccggagcgggcgaggaggatgcgctgccg
tcagatatccagatgctgaggcggcaggccatgacggcctacggcagcagcagcatttac
atggcccaggacttctacacccaccatgttccccttcctgtgcctggcgctgcttccaag
cggacacaggcgccacaaggggctgcgaagcagcctcagaggcagcagcgtgtggcagca
taa

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