KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_38998
Entry
COCSUDRAFT_38998  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K14306  nuclear pore complex protein Nup62
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSUDRAFT_38998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_38998
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     COCSUDRAFT_38998
SSDB
Motif
Pfam: Nsp1_C CTD Fez1 APG6_N
Other DBs
NCBI-GeneID: 17045293
NCBI-ProteinID: XP_005651822
JGI: 38998
UniProt: I0Z9F9
LinkDB
AA seq 647 aa
MAFGGGGGFNFGGSSTPAFGASSTPAFGSSASTPAFGSGGFGAAASTPAFGAAASTPAFG
TSTGFTGFGGSGGAFGASSAPAFGASSAPFGAASTPAFGAPASTPGFGAASAPAFGTPST
PAFGASAPGFGGFGSAASSASAFGTPTSTPAFGGGFGASTPAFGAPTSSAASAPSFGGFG
ASTAAFGAGSAPAFGASPATPGFGGLFASSAPSGGLFGTTQTSLAPVNTSSAPSFDAPAS
QPALGGLSFGSTPAPAASPAPAPAPAPPASTGGGFGGFSFGPSSAAASAAASAPAPSFGA
PAASAPAAATPSFGGFGGTSGGFSLSNPAPASSAAAPSFGLGGTSLGASSSPAPFSFTLA
SGSAATPASGAAPAAPPVSGALPAASSAPAVAASSTPAPLSFGFGSAAASAPPSSLTVAI
PSSAAPAASAPPAAAPASAPAATTALVPQIPSEIKGKTVEDIISQWDMELEKRSRAFMGH
AIALADWDRAILANRHSLLTVEEQLRKAAAGQEALEKKVGMLETHQKEIHDALLSMENEA
ARLYQEEKGMADDEARQRDALYERAERLASTLAAIGDSLRDAVADVNAGKCCRYTGAAAS
MGDTSTPLGKAVRILNNQLQALTAIDERTDALETRLDKLSAPANGMA
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggcttttggtggaggaggaggcttcaattttggaggctcgtcaactcccgcatttggc
gcgtcttcgacgcctgcatttggcagctcagcatccacacctgctttcggctctggaggc
tttggtgcagcagcatcgacgccagcgtttggggcagcggcatccaccccagcctttggg
acgtccactggcttcacaggctttggcggcagcggcggggcctttggggcctcttccgct
cctgcctttggagcatcttccgccccttttggcgcagcatcaacccctgcctttggtgcc
cccgcatcgacccccggcttcggcgccgcatccgcgccggcttttggcaccccgtcaacg
cccgcctttggcgcatcagctccaggatttggaggcttcggaagcgcggcgtcttctgcg
tcagcattcgggacgcccacctccacgccggcgtttgggggcggctttggggcgtccacc
ccggcctttggggcgcccacctctagcgcggcgtccgcgccgtcgttcggcggcttcggt
gcgtccacggccgcgttcggcgcaggatccgcgccagcctttggtgcgtccccggcgacg
ccaggtttcggcggtttgtttgccagctcagccccgtcaggaggcctctttgggaccaca
cagacctccttggcccctgtcaacacatcttcagctcccagttttgatgcaccagcttcc
cagccggcactgggcggcttgtcatttgggtcaaccccagcgccggcggcctcgcccgca
ccggcccccgcaccggcgccccctgcttccacgggcggcggctttggtgggttctccttt
gggccttcgagcgcggctgcgtcggctgccgccagcgccccggcgcccagctttggcgcg
cctgctgcaagcgcccccgctgcggccacgccctccttcggtgggtttggaggtaccagt
ggcggcttctctctgagcaacccagcaccggcgagctctgctgccgcgcccagcttcggc
ctgggcggcacctcactgggcgcgtcctcctcgcccgcgccattttctttcacactcgcc
tcgggctccgctgcgactcctgcctccggcgctgcgcccgctgctccacctgtgtcaggt
gccctgcctgcggccagctcagccccagcagtggcagccagctctactccggcgccgcta
tcctttgggtttggcagcgctgctgcttccgctccaccctcctccctcacagtcgccatc
ccttccagcgcagcacccgccgcaagcgcccctccggccgctgcgccggcctctgcgccc
gctgccaccacggcgctggtcccacagatcccctctgagatcaagggcaagacggtggag
gacataataagccagtgggacatggagctggagaagcggtcgcgcgctttcatgggccac
gccatcgcgctggccgactgggaccgcgccatcctcgccaaccgccactccctgctcacc
gtcgaggagcagctgcgcaaggcggctgctgggcaggaggcgctggagaagaaggtgggc
atgctggagacgcaccagaaggagatccacgacgcgctgctgtccatggagaacgaggcc
gcccgcctctaccaggaggagaagggcatggcggacgatgaggcgaggcagcgcgacgcc
ctgtacgagcgcgcagaacgccttgcctccactctggccgccatcggcgactccctgcgc
gatgcggtcgccgatgtcaacgcaggcaagtgttgtcgatatacaggagctgctgcgtcc
atgggcgacacatcgacgccgctcggaaaagctgtgcgcatcctgaacaatcagctgcag
gcgctgacggccatcgatgagcgcactgatgccctcgagacccgcctggataagctctct
gctcctgccaatggcatggcttga

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