Coccomyxa subellipsoidea: COCSUDRAFT_39076
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Entry
COCSUDRAFT_39076 CDS
T02914
Name
(RefSeq) RNA-binding domain-containing protein
KO
K14573
nucleolar protein 4
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCSUDRAFT_39076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_39076
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
COCSUDRAFT_39076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
17045406
NCBI-ProteinID:
XP_005651935
JGI:
39076
UniProt:
I0Z9S2
LinkDB
All DBs
AA seq
992 aa
AA seq
DB search
MAEADSTDPRTVFIKGISFDWDNSDFEKAVSDVGPVRKCFLLKGAGKHHKGCGFVTFALQ
EDAQRAVQELSGKKLGGRTIQARTALTQTHFIIPTNQPNQPHLQAPFAERKDKKRKRTED
APARPGDAEAATAAVTAPQQPSPAAEAAAASPAAERKPRKSKKQRVGQKSGEAKPAGDNA
KHALVRTVALGNLSAGNRDQALAYAGSDTAAHSVVQPSQADLDSHVLQRDGCAGDVVFLV
YSTVKDALAAVEKLHNHVLQDGDGGGTGPRGKKSKAGASSGTLLWARQVSGEGAHLKKWR
LILRNLPFNVKEVDLRELLAPAGFVWELTVPRNPDGKARGFGFAGFMCRAHAERAIKLAN
AKMVGGRTIAVDWAVPKAQFQSNTPAEAPAGEGNDALAEGSISDDEGDTAGEEEPVSEQE
DEGANDLELEDEKKLLRNVLSQIDDGDEDEAPQPAAKAGKKAAKEKQKPQADLPEAQATP
QDAAADEILAGAARGEAAAPQHKGEVQATVFVRGLPLDVLQYELHERLSRFGKLKACRLV
QDKGTKKLKGTAFVEFEQQADAQAAADACAKARSGQGAALAVRGSPIEVDLALTQDDARQ
LAGASKAQPGGKDNRNLYLLKEGQIEEGSPAWQAMSTADRAKRKRAAAEARTKLKSPNYF
LSRTRLCLRNLPPKLSEKGLKDLVLAAVKERAAKAQPTVKQVKILRDADKAGTDGQAASK
GLGFVELVEHEHALCALRQLNNNPVPFGTERRPVVEFAIENAQTLKKREIRRRSINADDT
RAPKGRDNAAAPADGAEPTPGDEPAVSKRTQRKRKREEKNNSKVSGRVESGTEAGTSGQA
GGAAAPSESPVPMQQSKRRKRELRAAARSGGKKGSPAAKSAAQVKSKAAPQQQAAKQQQA
AKQQQVPQQAQREPADGAARKPLPIKQKKRAQADGADGGSAQQKGKKRQRTGVEKADKLD
SLVTQYKAQLFGEGAGKGAKGGLKSSMQRWFE
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgacagtacagatccgaggactgtcttcataaaggggatcagttttgac
tgggacaattcggacttcgagaaagcagtcagcgatgtggggcctgtccgcaagtgtttc
cttttgaagggtgcaggcaagcatcacaagggctgtggctttgtgacttttgctctgcaa
gaggatgctcaaagagccgtccaggagctcagcggcaagaagctgggtggacgcaccata
caggcaaggacagctctgactcagacgcacttcataattccaacaaaccagccaaaccag
ccacacttgcaggcaccctttgcagagcgcaaggacaagaagaggaaacgcacagaggat
gcacctgcccgccccggcgatgcagaggccgccactgcagccgtcacagcgccgcagcag
ccatccccggcagcagaggcggcagcagcctctccggcggccgagcgcaagccacgtaag
tcaaagaagcagcgcgtcggccagaagtctggcgaggcaaagccggcaggggataatgcc
aagcacgccctcgtgcgcacagtagcgctggggaatctgtcggcggggaatagggatcag
gcgttggcgtatgcagggagcgacactgccgcccattccgtggtgcagccgtcgcaggcc
gacctggactcgcacgtgctgcagcgcgacggctgcgccggcgatgtggtcttcctggtg
tactccacggtgaaggatgcactggcagcggtggagaagctgcacaaccacgtgctgcag
gacggggacggcggggggaccgggcccaggggtaaaaagtcgaaggcgggggcgtcgagc
gggacgctgctgtgggcgcgccaggtgtcgggcgagggcgcccacctcaagaagtggcgc
ctcatcctccgcaatctgcccttcaacgtgaaggaggtagacctgagggagctgctggcg
cctgccggctttgtctgggagctgactgtgccgcgcaaccctgacggcaaggctcggggc
tttggctttgctgggttcatgtgcagggcgcacgctgagagggccatcaagctggccaat
gccaagatggtgggagggcgaaccattgctgtggactgggcggtcccaaaggctcagttc
cagagcaacacacctgcagaggcgcctgccggagaggggaatgatgcgcttgcagagggc
agtatatcagacgatgaaggagacacagcaggagaggaggaaccagtcagtgagcaggag
gatgagggggcgaatgacttggagctggaagacgagaagaagctgctgcggaacgtgctg
tcccagatcgatgatggggacgaggatgaagcaccacagccagcagccaaggcaggcaag
aaggctgcaaaggagaagcagaagccacaggccgacctgccagaggcgcaggcaacgcct
caggatgccgctgcggatgagattttggctggcgcggccagaggagaggcggctgcaccg
cagcacaagggcgaagtgcaggcgacggtgtttgttcggggcctgccactggacgtgctg
cagtacgagctgcacgagcgcctttctcgctttggcaagctcaaagcctgcaggttggtg
caggacaagggtacgaagaagctcaagggaacggcctttgtggagtttgagcagcaagcc
gacgcgcaggccgccgcagatgcatgcgccaaagccaggtcggggcaaggcgctgcgctg
gcagtgcggggcagccccatagaggttgacctggcgctgactcaggacgacgcacgccag
ctggcaggcgccagcaaggcccagcccggcggcaaggacaaccgcaacctctaccttctg
aaggaggggcagatagaggaggggtcaccggcgtggcaggccatgtcgacggccgaccgc
gccaagcgcaagcgcgcggcggccgaggcgcgcaccaagctcaagagccccaactatttc
ctgtcacgcacgcggctgtgcctgcgcaacctgccgcccaagctctccgaaaagggcctc
aaagacctcgtcctggctgctgtgaaggagcgggcggcaaaggcgcagccgacggtaaaa
caggtgaagattctgcgcgacgccgacaaagcgggtacggacgggcaggcggccagcaag
gggctgggctttgtggaactggtggagcacgagcacgcgctgtgcgcgctgcgccagctc
aacaacaaccccgtgccctttggcaccgagcggcgtccggtggtggagtttgcgatcgag
aatgcgcagacgctcaaaaagcgcgagattcgccgccgcagcatcaacgccgacgacacc
cgggcgccgaagggccgagacaacgccgcggccccggcagacggcgcggagccgacaccg
ggagacgagccggccgtgtcaaagaggacgcagcgcaagcgcaagcgcgaggagaagaac
aacagcaaggtgagcggcagagtggagagcggtaccgaagcgggcacatcagggcaggct
ggtggtgcagctgcgccgtctgagagcccggttccaatgcagcagagcaagcggaggaag
agggagctgagggcggcagccaggtcagggggtaaaaagggaagccctgccgcaaaatct
gcggcccaggtgaagagtaaggctgcgccgcagcagcaggcagcaaagcagcagcaggcg
gcaaagcagcagcaggtaccacagcaagcgcagagagagccggcagacggcgcggccagg
aagcccctccctataaagcagaagaagagggcgcaggctgacggtgcagacggcggctct
gcgcagcagaaggggaagaagaggcagaggactggggtggagaaggcagacaagcttgat
agcctggtgacacagtacaaagcacagctgtttggggagggcgctgggaagggcgccaag
ggcggcctcaagtcttcaatgcagcggtggtttgaatga
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integrated database retrieval system
