Coccomyxa subellipsoidea: COCSUDRAFT_39475
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Entry
COCSUDRAFT_39475 CDS
T02914
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12890
serine/arginine-rich splicing factor 1
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSUDRAFT_39475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_39475
Spliceosome [BR:
csl03041
]
Common components
Common spliceosomal components
SR proteins
COCSUDRAFT_39475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
17044373
NCBI-ProteinID:
XP_005650907
JGI:
39475
UniProt:
I0Z6U4
LinkDB
All DBs
AA seq
343 aa
AA seq
DB search
MAHRGCVIFVGNLPGDVREREIEDLFYKYGRIRNIDLKLPPRPPAFAFVEFEKPSHAEDA
VKGRDGYVFDNNPIRVELSRGGMGGRSGGDKTSGAPPRDRDEPRGGGGGATFGRAAPPPV
PSNFRQKGSAYRATVKNLPMSASWQDLKDHFRKVCTPNYVNVFRDRGGVLGVVEFDTPED
LARAIRKLDDTEFRNPFERAYIRVVDDSDDKRNHGKRSRSRSRSRRAPALLNLSLLQDVQ
WDSRSYSRSRSRSGSDSRSRSRSRSSSRSKSSRSPSKSRSRSVSARSDRSDKKADDKKAD
DGEKEAEVNGADDKADEPSPMDDDKADSPAAANGAGHKDEADD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcccacaggggttgtgtgatctttgttggcaacctgccaggcgacgtgcgtgaaaga
gagatcgaggacctcttttacaagtatggccgcatccggaatattgacctgaagttacca
cccagaccgcctgctttcgctttcgtggagttcgaaaagccaagccatgctgaggacgca
gtgaaggggcgagacggctatgtctttgacaacaaccccatccgcgtggagctgtccagg
ggtggcatgggcggcagaagcggtggtgataagacctcgggtgctcctcctagagacagg
gatgaaccgcgcggcggcggcggcggcgccaccttcggcagagctgcgccgcccccggtg
ccctccaacttccgccagaagggcagcgcctaccgcgccactgtgaagaacctccctatg
tccgcctcctggcaggacctcaaggaccacttccgcaaggtgtgcacgcccaactacgtt
aacgtgttccgcgaccgcggcggcgtgctgggagtggtggagtttgacacgccggaggac
ctggcgcgcgccatccgcaagctggacgacaccgagttccgcaaccccttcgagcgcgcc
tacatccgcgtcgttgacgactccgacgacaaacgcaaccatggcaaacgctcccgctcc
cgctcgcgctccaggcgcgccccagcactgctgaacttatctctccttcaggatgtgcaa
tgggactcgcgcagctactcgcgcagccgttcgcgcagcggcagcgatagccgctcgcgc
agccgctctcgctcgtccagccgcagcaagtcaagccggtctcccagcaagtcgcgcagc
cgctccgtgtcggcccgctccgaccgctcggacaagaaggcggatgacaagaaggcggat
gacggcgagaaggaggccgaagtcaacggcgccgatgacaaagcggacgagccttccccc
atggacgacgacaaggccgacagccccgcggccgccaatggcgcaggccacaaggacgag
gccgatgactga
DBGET
integrated database retrieval system
