Coccomyxa subellipsoidea: COCSUDRAFT_39598
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Entry
COCSUDRAFT_39598 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K13345
peroxin-12
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
COCSUDRAFT_39598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csl04121
]
COCSUDRAFT_39598
Ubiquitin system [BR:
csl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
COCSUDRAFT_39598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
TetR_C_31
Motif
Other DBs
NCBI-GeneID:
17044533
NCBI-ProteinID:
XP_005651067
JGI:
39598
UniProt:
I0Z7A4
LinkDB
All DBs
AA seq
384 aa
AA seq
DB search
MSFLTVGGDGSTRPTFFELIAADRLMPSLRAAVIYSLSVFAQRRPVLHRVLDWEDEFFAL
VTAFLDRQSLANSSATFADTLYGLRRAPYAPNEPSRSLTPHQQNVTLLLLVGVPYVKAKL
EALYNRHRRPTEGLLGLTLRRPVAPESNAANQQSVLQRGASSGSTWRHRVAQARAIGLAA
FMRLYPWLHMLQEGLSFSYQLAYLLQASPYFSPTLHLLRQHVERASGQQLVLADRAKRQQ
RRQEITGVRSSGNFIARLVQEGLLRTSYAFSDHTRNALILAIFGFKLLEWWYTSAEEKLA
AEKKLAPPPPPPPPMPASGGMALPSDPSLCPICQQARTNPAMTTVSGYAFCYPCLFNFIS
QEGCCPVTRVPATVDSVRRLYQST
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccttaccgtcggtggtgatggttccacacgtccgacattttttgagcttatt
gctgccgatcgtctgatgccaagtttgagggcggcagtcatatactccttgtcggtcttt
gcacagcggcggcctgtactacacagagtgctggactgggaggacgagttcttcgccttg
gtgacagctttcctggaccgccagagcttggccaactcatcagccacgtttgctgacacc
ttatatggtctgcgacgggcgccttatgccccaaatgagccatcccgcagcttgacaccc
caccaacagaatgtcaccctcttgctcctggtcggtgtcccatacgtgaaggcaaagctg
gaggcgctttataaccggcatcggcgtcccacggagggcttattggggctgacattaaga
agaccggtcgcacccgagtccaatgcggcaaatcagcagagcgtgcttcagagaggggcc
agcagcggcagcacatggcggcatcgggtggcccaggctcgggcgatagggctggcggca
ttcatgcggctgtatccctggctgcacatgctgcaggaggggctgtccttctcctaccag
ctggcctacctgctgcaggcctcgccctacttctcgccaacgctgcacctcctcaggcaa
catgtcgagcgcgcttcagggcagcaactggtccttgcggacagagcaaaacggcagcag
cgcaggcaagagattacgggcgtgcgcagctctggcaacttcattgcgcggctagttcag
gaagggctgctgcggacgagctatgcgttcagcgatcacactcgcaacgcgctcatcctc
gcaatctttggcttcaagcttctggagtggtggtacacgtcagcagaggagaagctagca
gctgagaagaagctagcgcctccgccgccgccgcctcctcccatgccggcctcgggcggc
atggccttgccatcagacccctcgctgtgccctatctgtcaacaggcgcgcacaaatccg
gcaatgaccaccgtgtcaggctacgcattctgttacccctgcttgttcaacttcatctcc
caggaggggtgctgcccagtcacgcgcgtcccagccaccgttgacagcgtgcggcgcttg
taccaaagcacatga
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integrated database retrieval system