Coccomyxa subellipsoidea: COCSUDRAFT_39642
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Entry
COCSUDRAFT_39642 CDS
T02914
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_39642
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
COCSUDRAFT_39642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_28
AAA_22
AAA_15
AAA_16
MMR_HSR1
AAA_14
AAA_24
RsgA_GTPase
AAA_18
AAA_27
AAA_33
NACHT
AAA
AAA_13
ATPase_2
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
17044602
NCBI-ProteinID:
XP_005651136
JGI:
39642
UniProt:
I0Z7H3
LinkDB
All DBs
AA seq
612 aa
AA seq
DB search
MVSEAKKKRAALKKAKTPGATAAKADAGSPNENSSPSNGVQEITKGVEDVGISNDRTCTS
VLTSHPQSRDIHLESLTLLFHGHELIADGNLELNFGRRYALVGPNGSGKSTLLKALGNRE
VPIPEHIDIYFLDREIPATDMTALEAVMSVDSERQRLEKEAESLLGEESEEAQARLEDLY
ERLDSLDASTTEARAARLLHGLGFTKTMQQKRTRDFSGGWRMRIALARALFVDPTFLILD
EPTNHLDLEACVWLEETMKHFKRILLLVSHSQDFMNNVCTNIIRLHQKKLHAYGGNYDTY
LNTRAELEDAQMKKHKWEQDQISHMKEYIARFGHGSAKLARQAQSKEKTLEKMVRSGLTE
AVKQDHVVKLHFTDVGKLPPPVLQFINVTFGYSPDRVLYSDVDLGVDLDSRVAIVGPNGA
GKSTLLKLMTGTLEPLDGMVKRHNHLKIGVYHQHLTELLDPKLTPLEYMLKEFPEGTTLE
GMRKAVGRFGITGKAQTQPILQLSDGLRSRLVFAWLAYKTPHILALDEPTNNLDMETIDS
LARAINNWDGGMVLVSHDFRLISQVAQEIWVVGDNTVTKWQGTIEEYKEHLKATHEALNE
GKNEVKKEMTER
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgaagcaaagaagaagagggcggcgttgaagaaggcaaagacacccggagcc
actgcagcaaaggcagatgcgggcagtcccaatgagaacagcagtcccagcaatggcgtg
caagagatcaccaagggtgtggaggacgtgggtatctccaacgaccgcacctgcacaagc
gtgctgacctcacacccgcagtcgcgcgacatccacctggagagcctgaccctgctgttc
cacggacacgagcttatcgcagacggcaacctggagctcaactttggcaggcggtatgcg
ctcgtggggccaaacggcagcggcaagtcgacgctgctgaaggccctgggcaacagggag
gtgcccatcccagagcacatcgacatctacttcctggacagggagattcccgccacagac
atgaccgcgctggaggctgtcatgagcgtggactcggagcggcagaggctggagaaggag
gcagagagcctgctgggggaggagagcgaggaggcccaggctcgattggaagatctctat
gagcggttggatagcctggatgcttccacaacagaagcgcgagcggcgcggctgttgcac
gggctcggcttcacaaagacaatgcagcagaaacgcacgcgagatttctccggaggatgg
cggatgcggattgcgctggccagggcgctctttgttgaccccaccttcctcatcttggac
gagccgaccaatcacctggacttggaagcttgtgtctggctggaggagaccatgaagcac
ttcaaaaggatcttgctccttgtcagccactcccaggattttatgaacaacgtgtgcaca
aacatcatccgcttgcatcaaaagaagctacatgcatatggaggcaattacgacacctac
ttgaacacaagagcggaattggaggatgcacagatgaagaagcacaagtgggagcaggac
caaatatcccacatgaaggagtacatagcacgcttcggtcatggcagcgccaaattggca
cggcaagcgcagagtaaagagaagacgcttgagaagatggtcaggagcggcttgacagag
gccgtgaagcaggaccatgtggtcaagctgcacttcacagatgtggggaagcttccgccg
cccgtactccagttcatcaatgtcacattcggatactcgcctgaccgggtcctctacagt
gatgtggacttgggggtggatttggacagcagggtggccatcgtggggccgaatggtgct
ggcaagtcgacgctgcttaagctgatgactggaacgctggagccgctggatggcatggtc
aagcgccacaaccacctcaagatcggcgtttaccaccagcacctcacagagctgctcgac
cccaagctcacacccctcgaatacatgctgaaggagtttcccgagggcacaacactggag
ggcatgcggaaggcggtgggccgctttgggatcacgggcaaggcgcagacgcagcccatc
ctgcagctcagcgacggcctgcgcagccgactcgtcttcgcatggctggcctacaagacg
ccccacatcctggccctggatgagcccaccaacaacctggacatggagacgattgactcc
ctggcgcgagccatcaacaactgggacggtggcatggtcctggtcagtcatgacttccgg
ctcattagtcaggtggctcaggagatctgggttgtgggggacaacacggtcaccaagtgg
cagggaaccattgaagagtacaaggagcatctcaaggcgacgcatgaggcgcttaatgaa
ggcaaaaatgaagtcaagaaggagatgactgagcgatga
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