Coccomyxa subellipsoidea: COCSUDRAFT_39748
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Entry
COCSUDRAFT_39748 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K14849
ribosomal RNA-processing protein 1
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csl01009
]
COCSUDRAFT_39748
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_39748
Protein phosphatases and associated proteins [BR:
csl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
COCSUDRAFT_39748
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
COCSUDRAFT_39748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
17044754
NCBI-ProteinID:
XP_005651288
JGI:
39748
UniProt:
I0Z7X5
LinkDB
All DBs
AA seq
451 aa
AA seq
DB search
MTLLVSFTQAELAERLAAVLPLLSAEGALLYFKVFAKTMQREWFGIDKLRLDKFMMLVRK
FLHQLFVHLQEGGWDSERTAAYCAFLSEEVFLMSDREPSAGFSLHLADIAVSELCAACDE
AGPVPRDALEALLEPFCLAAARTKRPALMARLQDGVFGELLEMGSNGALANMDMQTMGAR
LFDLGAQSEVRARNREVLYALSKLFERAEAKRQKKLNEPARPPAPASGAGSGAPPAAAGS
RGAGTEAPVKQSGKKQRAAEAPCASDLAGACEGELPAPSTPLTTQGAAAAAPAKQSGKKR
KQTVDLPATQLNGQSGAQSTGKKRKKSMAALVAEAAAMKAGRSAGGAQPVAASTPDAATP
SGRPPTTPSSAIAAAAKLTESQRKKQVKFQMKNNLYFEKGGPVPPAEVRTPPTAKPKGSA
LKKTSSVAPRPKSPRMQGSGLKRKTKAALFF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgactttgctggtgtctttcacacaggcagagcttgcagagcgcttagcagccgtcctt
ccattgttgagtgccgagggagcgctgctgtacttcaaggtgtttgccaagacgatgcag
cgggagtggtttggcatcgacaagctccgcctggacaagttcatgatgctcgtgcgcaag
ttcctgcaccagctcttcgtccacctgcaggagggtggctgggacagcgaaaggacggcg
gcatactgcgcgttcctgtcagaggaggtattcctgatgagcgaccgggagccgtcggct
ggttttagcctgcacctggcggacattgctgtttcagagctgtgcgcagcctgtgatgag
gcgggccctgtgcccagagatgcgctggaggcattgctggagccgttctgtctcgctgca
gcgcgcacaaagaggccggcgctgatggcaaggctgcaggacggagtctttggagagctg
ctggagatgggcagtaatggagcactggccaacatggacatgcagaccatgggtgccagg
ctctttgacctcggtgcgcaatcggaagtcagggccaggaatagggaggtgctgtatgct
ctcagcaagctcttcgagcgcgcggaagccaagcggcagaagaaactaaacgaacctgcg
cgtccgccggctccagcctctggcgctggctctggtgcacctccagcggcggcagggagt
cgcggtgctggcacagaggcccctgtgaagcagagcggcaagaagcagagggcagctgaa
gcgccctgtgccagcgacctggcaggggcatgcgagggggagctgccggctcccagcact
cccctcacaacgcagggtgcagcagcagctgcaccagcaaaacagagtgggaaaaagcgg
aaacagacagtagatctgcctgcaacgcagctgaatggtcagtcgggcgcgcagtccact
gggaagaagaggaagaagtccatggcggccctggtggctgaagctgccgccatgaaggct
ggcaggtccgcaggtggcgcgcagccggtggctgcctccacacccgatgcagccaccccc
tcagggcggccacctaccactccatcgtcagccattgccgcggctgcaaagctcacagag
tcccagcgcaagaagcaggtcaagtttcagatgaagaacaatctgtactttgaaaagggc
gggccggtgcccccagcagaggtgcggacgccgccgacggcaaagccaaagggcagcgcc
ctcaagaagacgtcatctgtggcgcccagacccaagagccccaggatgcagggaagcggg
ctgaagaggaagaccaaggcggccctcttcttctga
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