Coccomyxa subellipsoidea: COCSUDRAFT_40245
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Entry
COCSUDRAFT_40245 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K08739
DNA mismatch repair protein MLH3
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCSUDRAFT_40245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_40245
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
COCSUDRAFT_40245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
Motif
Other DBs
NCBI-GeneID:
17044087
NCBI-ProteinID:
XP_005650627
JGI:
40245
UniProt:
I0Z614
LinkDB
All DBs
AA seq
1051 aa
AA seq
DB search
MTQGLITLGFRGEALASLAEAACLEITSKARGAFETHTKLLQGGRVLKEGLALEQRIKQG
TRVTVRDLFFNKPVRRKHLIGAGIKKEVDDCREHILRLALPRSNVGFTFVDSMRHDVLLC
LKRGRTERDVLPLVFGQRLVQCGACHDGPIKAELYICNPLEGFASKARQYMYVNGRYVSG
DAASKLLNDLFQQLLQDLNRRGCEQQGRLRRFPAFICHISCPPGLPDVTARPDKTAVQFT
DWTPVLSAVRGAAMQAWHEFAPLWLLTPRPASAPAQPSATQPRESLAAVGSQGGASCAAA
EGMSAVQRAKAASCGAAVAAGGRDRAEHRAAKRVRFSLDAEIDTARMGMESAPGGPLRTQ
EGPAEPAHGSAWMRSGSLQDASEAAWLDVSQGDASRAAIPALSWLHSSDWDGQPTHCWSE
NAAEEAQQAEVGVSDPEGASMAGVRGSFEGPDSGIGPSGFPQSPSTAAFAAQLPHSPTLP
SPARYSPEDFIASPSAPAGSTERQWQPQLGFRVQRRPCGPSLAPEGRRNVAGCSMTDQIQ
SPSSSAGLNGEPLWPADAQMASASGQSMDSALAEWMERDDEECETLAAALCRADEAAQLP
AGHSEGPSLSNQQQQQQKQLGRAERSAEADIADLLEGCVANRRPPAGRQRASSAPPHHRS
RMRAAHTNPLASLCSSGRGLTSLHDPPANHAACGQPGISMEECQAKEGSGRRQSASTVPA
KRRGKRGSQTVSGVCSRPGLAMAPKRQQRHPDAGSEPLSEANLTHNSAPEGGRAEEAGRN
SCASGGSGASAAVQGGTLADLLREWVNPACASSQRQVPDLAGLACGNLLGLVPASITKKA
LAAARPLRQVDRKFIPLVCGSQLAIMDQHAADERVQLEHLQDQVVGAGGVPVATHSCTLS
PPQPLDISAAEQHTLDRFNDILEAWGWHWDIPGACTIESAAAHGGARLTHAAVVLGTPLN
GVELQTFLHQLESTGGSAKVPPGVLRVLASKACHSAIRFGDVLDIDQCERLLENLKSTRA
WHCCAHGRPTVAPLVDVTALHRVIALRGCAS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgacacagggcctaatcactttgggtttcaggggggaagcacttgcatctcttgcggag
gcggcctgtctggagatcacatccaaggcaagaggggcctttgagacgcacaccaagctc
ctgcaaggggggcgggtcctcaaggaagggcttgcgcttgaacagcggatcaagcagggc
acaagggtgaccgtcagggacctcttcttcaacaagccagtgcgcaggaagcatctcatt
ggggcagggatcaagaaggaagtggatgactgtagagagcacatcctgcggttggcgctg
ccgcgctcgaatgtgggcttcacctttgtggacagcatgcgtcatgacgtgctgctttgc
ctgaaaaggggccgcacagaaagggatgtcctgccgctggtgtttgggcagcggctggta
caatgtggggcatgccatgatgggcccatcaaggccgagctctacatatgcaacccgctg
gagggctttgcctccaaagcacgccagtacatgtatgtgaacggccgctatgtcagcggg
gatgccgcctccaagctcctcaatgacctcttccagcagctgctgcaggacctgaacagg
cgcggctgcgagcagcagggcaggctgcggcgcttcccggccttcatctgccacatcagc
tgcccgcccggcctgcccgacgtgaccgcccggccagacaagaccgccgtacagtttact
gactggaccccggtgctcagcgctgtccgaggcgccgccatgcaggcctggcacgaattt
gcccccctctggctgctcacccctcgccccgcctcagccccggcccagccgtcagctaca
cagcccagagagtcattggcagcagttggcagtcagggaggggcaagctgtgcagccgcg
gagggcatgtcagcggtgcagcgggcgaaggcggcttcttgcggcgcagcagttgcggca
ggaggcagagacagggcggagcacagggcggcaaagcgggtccgcttctcgcttgatgct
gaaattgacaccgcccgcatgggcatggaatctgcacctggggggcccctcaggacgcag
gaaggcccagcagagcctgctcatgggtcagcatggatgcgcagcggcagcttgcaggat
gcgtcagaggcagcctggctggacgtgagtcaaggagatgccagccgagcagccatccct
gcgttgagctggctgcacagcagtgactgggacggacagccaacccattgctggagtgag
aacgcagcagaagaggcacagcaagcagaggtgggcgtcagtgatcctgaaggagccagc
atggcaggcgtaagggggagctttgaaggtccagacagtggcatcgggccatcgggcttc
ccacagagccccagcacagctgcctttgctgcgcagctgccccactcacccacgctgccc
agccctgcacgctactcgccagaagatttcattgccagcccaagtgcacctgcaggcagt
acagagcgccagtggcagccgcagcttggcttccgcgtgcagcggcgcccatgtgggccc
agcttggcaccagagggacgtcggaatgttgcaggctgcagcatgacggaccagattcag
tcacccagcagctccgcgggactcaacggcgagcctctctggccggcagatgctcagatg
gcttcggcaagcgggcagagcatggacagtgcactcgcagaatggatggaaagggatgac
gaggagtgcgagacgcttgcagcagcactctgccgtgcagatgaggctgcccagcttcct
gctggacacagcgagggacctagtctctcaaatcagcagcagcagcagcagaaacaattg
gggagggcagagaggagtgcggaggcggacattgcggatctgcttgagggctgcgtggcc
aatcgcaggccgccagctggcaggcagcgcgccagctcagcgccacctcaccaccggtcg
cgcatgcgcgcggcccacaccaacccactcgccagcctgtgctcctctggcagaggcctc
acctccctccacgatcctccagccaaccatgcagcatgtgggcagcctggaatcagcatg
gaggagtgccaggcaaaggaggggagtggacgaaggcagagtgccagcactgtgccggcg
aagaggagagggaagcgcggatcccagacagtgtcaggcgtgtgcagcaggcctgggctg
gcaatggcccccaagaggcagcagcgacatccagatgctgggtcagagccgctcagcgaa
gcaaatttgacacacaacagtgctccggagggaggccgagcagaggaagcaggaaggaac
tcgtgtgcatcaggaggaagtggcgcatcggcggcggttcagggtggcactttggcggat
ctgctgcgcgagtgggtcaacccggcgtgcgcgtccagtcagcggcaggtgcctgatctg
gccggcctggcatgcggcaatcttctgggccttgtgcctgcctccatcacaaagaaggcc
cttgccgctgctcggcccctgcgccaggtggacaggaagttcatcccgctggtgtgcggc
tcccagctggccatcatggatcagcacgcggccgatgagcgcgtccagctggaacatctg
caagaccaggtggtgggtgcgggtggtgtgcctgtggccacgcacagctgcacgctgtca
cctccacagccactggacatcagcgcagcggagcagcacacgctggacaggttcaacgac
atcctggaggcctggggctggcactgggacattcctggcgcatgcactatcgaatctgca
gcagcacacggtggcgccaggctgacacatgctgctgtggtgctgggcacgcccctgaac
ggggtcgagctgcagacctttctgcatcagctggagagcactggcggctctgccaaggtg
cctccaggagtcctgcgcgtgctggcctccaaagcctgccactctgccatccggtttgga
gacgtcctggatatcgatcagtgtgagcggctgctggagaacctgaagagtaccagagcc
tggcactgctgcgcgcatgggcgtcccacagtggctcctcttgtggacgtgactgctctg
cacagagtcattgctctgcgaggctgcgcaagctag
DBGET
integrated database retrieval system