KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_40900
Entry
COCSUDRAFT_40900  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K15181  negative elongation factor C/D
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    COCSUDRAFT_40900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csl03021]
    COCSUDRAFT_40900
Transcription machinery [BR:csl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     COCSUDRAFT_40900
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 17042529
NCBI-ProteinID: XP_005649071
JGI: 40900
UniProt: I0Z1K8
LinkDB
AA seq 552 aa
MASLVVEWTKGLQDEELAEESASIAAFDEAYYLRELAKELFDPDKFSGVFTSGGSGPPRE
GRQLIYELSAKHRNCLLLNYAIQKILQAGHEDEVASVGSSLASYFGVFHRLMANRLKEVA
QADADRVDSLAAELKETCCQGQHTYVHAQQILTELGQHPRGSRFRRLSQELEAHAAAQRG
AIVWQMHAWFAAKSSSEPEVAAEAAVAQLLSAAEARRQGRPEGNAAWRPAPPLGNRGGPA
GPNQAMQRLHALYSADTPPPINTIRHPQVFKVLLDGLFMPGAQLASEDHEAHVELLALAA
AAVDDRPSGRLDLEDVDVTKVALQQAHAVAQSAAMGVRFGPREQVQAEAAAQCAVAAAGL
MRAMARPLGSAQYWREYHGSAAPAFLTLLSLIIPQQPALNPQAVDIIAAALKAMGNAKPD
IARTLLELGVAVLAAGQVMRMLSAGKRGSLTEFDNTAAAEQWAKTADPSLVRHFIFCVLA
AVSPPFSSQFASPIIRLMQASGVKRSRAGVREGQRVEQLEEFAAACAHVDFRPPLSAKQA
AFLHSLQAERLY
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggcaagcctcgttgtggagtggaccaagggcctgcaagacgaggaattggctgaagag
tctgcctcaattgcggccttcgatgaggcctactacttgagggagctggccaaggaactc
ttcgatccagacaagttctcaggggtgttcacgagcggaggcagcggtcctcccagggag
ggccgccagctcatatacgagctgagtgcgaagcaccgcaactgcctgctgctgaactac
gcgatccagaagatcctgcaggcgggccacgaggacgaggtggccagtgtgggctccagc
ctggcgtcctactttggcgtgttccaccgcctcatggccaaccggctcaaggaggtcgcc
caggccgacgccgacagagtggactccctagctgcagagctcaaggagacatgctgtcag
gggcagcacacgtatgtgcacgcgcagcagatcctgacggagctggggcagcatccgcgc
ggcagccgcttccgacggctcagccaggagctggaggcccacgcggccgcgcagcgtggc
gccatcgtttggcagatgcacgcctggtttgcggcaaagagcagctcagagcctgaggta
gcggcggaggcggcagtggcgcaattgctgagcgccgcggaggcgcgcaggcaggggcgg
ccggaaggcaacgctgcgtggcggccggccccaccgctgggaaaccgcgggggccctgcc
gggcctaatcaggccatgcaacgcctgcatgcgctgtacagcgccgacaccccgccgccc
atcaacaccataaggcatccacaggtgttcaaggtgctcttggacggcctgttcatgccg
ggcgcgcagctggcgtccgaggatcacgaagcacacgtggaactgctcgccctggcagct
gccgcagtagatgacaggccttcaggcaggctggatctggaggatgtggacgtcaccaag
gtggccctgcagcaagcacacgccgtagcgcagagcgctgccatgggtgtccgctttggg
ccgcgagagcaggtgcaagcagaggcggcggcgcagtgcgcggtggcggctgcggggctg
atgcgagcaatggcgcgtcccctgggcagcgcgcagtactggcgcgagtaccacggctcg
gccgcgcccgcattcctcaccctcctctcgctcatcatcccccagcagcccgccctcaac
ccccaggccgtggacatcattgccgctgccctgaaggcgatggggaatgccaagccggac
atcgcgcggacactgctcgagctaggagtggctgtgctggcagccgggcaggtcatgcgc
atgctgtcagcagggaaaagagggagtctgacagagtttgacaatactgctgcagcggag
cagtgggcaaagacggcggatccctcacttgtgcgacacttcatcttctgtgttctggca
gccgtctctccgccattctcatcacagtttgcctcgcccatcatcaggctgatgcaggcg
agcggggtgaagcgcagccgggcaggggtgcgcgaggggcagcgagtcgagcagctcgag
gagtttgccgccgcatgcgcgcacgtcgacttccggccgccgctgtccgccaagcaggcg
gcgttcctgcacagcctgcaggccgaacgcctctattag

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