Coccomyxa subellipsoidea: COCSUDRAFT_41360
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Entry
COCSUDRAFT_41360 CDS
T02914
Name
(RefSeq) Dom34 protein
KO
K06965
protein pelota
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSUDRAFT_41360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_41360
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
COCSUDRAFT_41360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
17042371
NCBI-ProteinID:
XP_005648586
JGI:
41360
UniProt:
I0Z073
LinkDB
All DBs
AA seq
381 aa
AA seq
DB search
MRLVNRSYQKNGEGHAKLVPEEGEDMWHVYNLIREGDRVTATTFRKIARDSGAGSESERV
RIKLTVQVEGVDFDPEGQSIRLRGKNLTETEHVKLGAYHTLELEPQRAFTLEKASWDSLD
IERIKQACDPAASADLAAVLITEGLANVCLVGSSTTILKAKVEANLPRKRGAAAAGYDKA
LESFFNKVFAAVTRHVDWSIVRCLVIAGPGFTKEEFRKYLDAEAVRRDIRELITNKQKVI
TSHASSAYKHALREVLEAQGIASQIKDTKAAQEVTALKAFYAMLGQDSARAFYGPGHVRA
AAELGAIQTLLLSDTLFRVNDIAKRAAYAQLVEGVRESGGEALVFSGAHVSGEQLDQLSG
VAAILRFPLPDLEDQELDPEL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgtcaatcgctcttaccagaagaatggagaaggccacgcaaaactggttcca
gaggaaggggaggacatgtggcatgtgtacaacctcatcagggagggggacagagtgact
gccaccacattcaggaagattgcccgcgacagcggagcaggcagcgagtcagagcgtgtg
cgcatcaagttgactgtgcaggtagagggcgttgactttgatccagaaggtcagagcatt
cggttacggggcaagaacttgacggagacggagcatgtcaagctgggggcgtaccacacg
ctggagctcgagccgcagagggccttcacgcttgaaaaggcctcatgggattccttggac
atagagcgcatcaaacaggcctgcgaccctgcagcctccgcagatctggccgcggtgcta
atcacagaagggttggcaaatgtgtgcctggtgggctcgagcaccaccatactgaaggca
aaggtggaagcaaatttgcctcgcaagcgcggcgcagctgctgccgggtatgacaaggcc
cttgagtccttcttcaacaaggtatttgcagctgtcacgcggcacgtggattggagcata
gtgaggtgcctggtcatagcaggacccggcttcacaaaagaggagttccgaaagtacctc
gatgcagaagcggtccgaagagatatcagggaattgatcaccaataagcagaaggtgatc
acatcgcatgcttcctccgcgtacaagcatgcgctcagagaagtgctagaagcccagggc
atcgcttcacagatcaaggacacgaaggcggcgcaggaggtgacggcgcttaaagcgttc
tacgcgatgctggggcaggacagtgcgcgcgcattctacggccccggccacgtccgcgct
gccgccgagctgggcgccatccagacgctgctcctctcggacaccctcttccgcgtcaat
gatatcgccaagagggcagcatacgcgcagctggttgagggggtgagggagagtggggga
gaggctctcgtgttttctggcgcgcatgtgtcgggagaacagcttgatcagctgtcagga
gttgctgcgatcctccgattcccattgccagacttggaggaccaggagctcgacccagaa
ttgtga
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integrated database retrieval system