KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_41451
Entry
COCSUDRAFT_41451  CDS       T02914                                 
Name
(RefSeq) NUC173-domain-containing protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_41451
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    COCSUDRAFT_41451
  Pre-60S particles
   Other pre-60S particles
    COCSUDRAFT_41451
SSDB
Motif
Pfam: RRP12_HEAT MMS19_C
Other DBs
NCBI-GeneID: 17042161
NCBI-ProteinID: XP_005648707
JGI: 41451
UniProt: I0Z0J4
LinkDB
AA seq 1322 aa
MSGEGKPNVAVGLVQVCAAMGTILSVTLSRVPNAVLRSKFAASSEILCSLVEEHAEQAAT
LKPVLSCLAMVTAAVDPREWASAARPFGLLLGLSLDERPKVRKRAQEGVIGVLAAVRGTS
AADAAGSTVARVCQQVLPGPEVAARAAAAASNKKRAEAEAAIAKAVTDALRILGLLKPAL
PLMPGTRVQEVVGLMLKLYVLRQPMLLRSATECLAALCAGSSSISAAALVEVLRNVVHME
TAWDSKDADSLISLINLVESGYIRLHELDATAAAERLPHAFHAVIPRLTGDLEGVRRRAE
EALNRLIAACLDDAAVAAAVNLAGAGMGASAGPPSAAAGVVASVAGALDPRTQDAWPSAL
SVSAALFERLGQRGARLAEPLLERVGDLCAAAAEAAEEADDEDDEERTAGAEYAGAAGAA
MSSALRNLGPEAVLQVLPLNLEEGMNGIGEARTWLLPMLHQHVSNARLAFWGGTLLPLAR
RMGSIAKDPANPHALACRALEAQLWQALPAFASWPEDTASAFRDHAKEIAMAFISRADLH
TPICTALYRLCTQNRDVLKASGQVEGLGYAGGPSATSNGDESDAEDEGQGVASEAPPSYT
PALAQQNVTVLRGFSKNWLKVMADAFCATQPGLRGPTGRAISAYAAISDPAVLTPFLKDA
LSKYVELTQAAQADVPSAALVAQGGNNTLSEQRCTFLELALALAVGLNTDCIKLLFTTAK
GAMQERDQAVQKRAYKLLAFITAKRRDFTLPALREVLETLLAGVTSSLSAAKRYRLACLQ
AAVLLLLAPDAPDVDLRGEDDAGMSAEEQRKQVVATLVSEIVLCVKEVNQKTRAAAYGLL
VDLGQAMHEADPPSLPSLDTHMGGLDLQGGSEGGSGGGGLATLFEMVLGGLVGTSPHMIS
ASVMALARLLHQFAPQLGGVAPTLLPAVLMLLRTKSREVVKAVLGFVKVCAVRLPVEVLE
QHMAQILEGLLLWSEDSKNKFRLKVRVIVERLARRCGYDAVAGAMPAGDKRLLIHIRREN
LRKQRLRSSEAGSQMDVDEEEDGRSRAKVAPTARGSTWNHTKVFSEGGSEGAPTRYSGPA
PGQRGQQRPGRSVKQGESRAVMASSANGDPLDLLDVGATRQMQRASLGAKPRRSADDYAR
GSDGRMIIQDEDAPPGVKRKRRAGGGFDDRLSDDSDFDDLRHIGGLAAGMRSASAKSVAL
AQTVATNAKTARTSRAGANSARSIGGRTSVGGRSKTTVKGRQHTGDRHAHHSWTMFKSKG
KAGGDQKGSSKVEPYAYWPLDRKMLNRRPSKKADAREGLDQVVKAARAGAAKGSKAKRHR
AQ
NT seq 3969 nt   +upstreamnt  +downstreamnt
atgtctggagaagggaagccgaatgttgctgtggggctggtgcaggtttgtgcagccatg
gggacaatcctctcagtgactctgagcagggtcccgaatgctgtgctgcgctccaagttt
gccgcatcatccgagatcttgtgttccctcgtcgaggagcatgccgagcaggctgcgacg
ctgaagccagtgctctcctgtctggcaatggtgacagctgcagtggatccgcgtgagtgg
gccagtgctgctcggccctttggcctgctgctaggtctctccctggacgagcggccaaaa
gtgcggaagcgcgcccaagaaggtgtcattggcgtgctggctgctgtgcgtggcacatct
gcagcagatgcagctggctccaccgtcgcaagagtgtgccagcaagtgcttccgggccca
gaggtggcagcccgagcagcagcagcggcttcaaacaagaaaagggcggaggcagaggca
gccatcgccaaggcagtgacagacgccttgagaatcttgggcttgctcaagcctgcctta
cccctcatgccagggacaagagtgcaggaagtggtggggctgatgctgaagctgtacgtg
ctgcgtcagccgatgctgttacgctctgcaacagagtgcctggctgccttgtgtgccggt
tcaagcagcatcagcgcggccgctctggtggaggtgctcagaaacgtggtgcacatggag
accgcatgggattccaaggacgctgactccctcatctcattgatcaacctggtggagtcc
ggctacatccggctgcatgaacttgatgcgacagctgctgcggagcgcttgccgcacgca
tttcatgcagtcataccgcggctgactggtgacttggagggcgtgcggcgaagagcggaa
gaggccctcaatcgcctcattgccgcctgcctggacgatgcggctgtggccgctgcggtg
aacctggccggcgccggcatgggcgcatcggccgggccgccgtccgccgcggccggcgtg
gtggcctccgtagctggagctctcgacccgcgcactcaggacgcctggcccagcgccctg
tcagtgtctgcggcgctttttgagcgactcggccagcgaggggcgcgccttgcggagccc
ctgctggagagggtgggagacctttgcgcggctgcggctgaagcagcagaggaggctgat
gatgaagatgatgaggagcggacggccggtgcggagtatgccggagcagctggtgcggcg
atgagctcggcgttgcggaacctggggcccgaggctgtgctgcaagtgctgccgctcaac
ctagaagaggggatgaatgggataggggaggcgcggacgtggctgctgccaatgctgcac
cagcatgtgtccaacgcgcggctggccttctggggtggcacgctgctgccgctggctcgc
aggatgggctccattgccaaggaccctgccaacccccatgcactggcgtgccgtgctctg
gaggcccagctctggcaggccctgcctgcctttgcctcctggcctgaagacaccgcctct
gccttccgggatcatgcgaaggagatagccatggctttcatcagtcgtgcggatctgcat
actccaatttgcacagccctatatcgcctgtgcacgcagaaccgggatgtgctgaaggca
tcaggccaggtagagggccttggctatgcaggagggccgagtgctacctcgaatggagac
gagtctgatgcagaagacgagggccagggtgttgcatcagaagcacctcctagctacaca
cctgcactggcacaacagaatgtgacggtcctgcgtgggttctccaagaactggctcaaa
gtgatggcagatgcattctgtgctacgcaaccggggctcagaggacccactggacgcgcc
atatcagcatatgccgccatcagtgaccctgcagtcttgacacccttcctgaaggatgca
ttgagcaaatatgtggagctgacacaggcagctcaggcggacgtgccttcggctgcgttg
gtggcacaagggggcaacaacacgctgagcgagcagcggtgcaccttcctagagctggcg
cttgcgctggccgttggcctgaacactgactgcatcaagctgctcttcacgacagcaaag
ggcgccatgcaggagcgggatcaagcggtgcagaagcgcgcgtacaagctgctggcgttc
ataacggccaagcggcgagatttcacgctgccggccctgcgcgaggtgctggaaactttg
ctggcgggcgtgacatcatcgctgtcagccgccaagcgctaccggctggcgtgcctgcag
gccgccgtgctgctgctgctggcaccggacgcccccgacgttgacctgcgcggcgaggac
gacgccggcatgagtgcggaggagcagcgcaagcaggtggtggcgacgttggtgagcgag
atagtgctgtgcgtgaaggaggtgaaccagaagacgcgcgcggccgcgtacgggctgctg
gtcgaccttgggcaggccatgcacgaggccgaccccccctccctgcccagcctggacacc
catatgggcggcctcgacctccaaggtggtagcgaggggggatcgggcgggggaggcctg
gcgacgctgtttgagatggtgctggggggcctggtgggcacctcgccccacatgatcagc
gcgagtgtgatggctctcgcgcggctgctgcaccagtttgcgccgcagctgggcggggtc
gcaccaacgctgctgcccgccgtactcatgctgctgcgcaccaagagccgtgaggttgtc
aaggccgtgctcggctttgtcaaggtgtgcgcggtgcggctgccggtggaggttctggag
cagcacatggcgcagatcctggaggggctgctgctgtggagcgaggactccaagaacaaa
ttccgcctcaaggtgcgagtgattgtggagcggctggcgcggcggtgcggctacgacgct
gtggcgggcgccatgccggcgggcgacaagcggctgctcatccacatccggcgtgagaac
ctgcgcaagcagcgcctgcgatccagcgaagccggctcccagatggatgtggacgaagag
gaggatgggcgctcgagggcgaaggttgcgcccacggcgcgcggcagcacatggaaccac
acgaaagtgttctctgagggcggctccgagggagcccccaccaggtacagcggccctgca
ccaggacagcgcggccagcagcggcccgggcggagcgtcaagcagggtgagtcacgggcg
gtgatggcgagctcggcgaatggtgatccgctggacctgctggacgtgggggccacccgg
cagatgcagcgcgcgtcgttaggcgccaagccgcggcggtcggcggacgactacgcgcgc
ggcagcgacgggcgcatgattatccaggacgaggacgcaccgccaggtgtcaagcgcaag
cggagggcgggtggaggctttgatgaccggctgagcgatgacagcgactttgacgacctt
cgccacatcggcggcttggccgctggcatgcgcagcgccagcgccaaatcagtggctctg
gcgcaaactgtggcaacgaatgccaagaccgcgcgcacgtcccgggccggtgccaatagt
gctcgcagcattgggggccgaacaagcgtcggcggccgcagtaaaaccactgtgaagggc
cgacagcacaccggcgacaggcatgcacaccactcctggaccatgttcaagagcaaaggg
aaggcaggcggtgatcagaaggggagcagcaaggtggagccgtatgcgtactggcccctt
gaccgcaagatgctcaacaggcgtccatccaagaaggcagatgctcgtgaaggccttgat
caggttgtcaaggctgccagggcaggtgcagcaaaagggagcaaggccaagaggcaccgt
gcccagtga

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