Coccomyxa subellipsoidea: COCSUDRAFT_41865
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Entry
COCSUDRAFT_41865 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K08492
syntaxin 18
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04130
SNARE interactions in vesicular transport
csl04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
COCSUDRAFT_41865
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
COCSUDRAFT_41865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_41865
Membrane trafficking [BR:
csl04131
]
SNARE
Syntaxin (Qa)
Stx-rER
COCSUDRAFT_41865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin-18_N
P22_AR_C
SNARE
Bles03
Motif
Other DBs
NCBI-GeneID:
17041694
NCBI-ProteinID:
XP_005648246
JGI:
41865
UniProt:
I0YZ83
LinkDB
All DBs
AA seq
272 aa
AA seq
DB search
MSQASFDRTHEFWEAVNVVAHKSGLTEAKNVDALRAFVKEHQRDYVQSGRCSEAERDRIE
EQVGRYMRSCTANIARLEASLGPDQPGARGLNPHMFAHRHGVALILSERLHAIGSSFDCC
RSVRYQQLKQQQLRQQQQRQRLSSNSTAYRPEFDAQQQSLPSNLNQEQQQLIEEENRALV
QQLMSLNQGATSIETTMRELATLNQMFSGQVFHQAQQIEQIYEQAVQATMNVDKGNVQLK
KAIRVGGSARSYLFWFFVIAAASLLFLDWFYS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagccagctttgatcgtacacatgaattctgggaggctgtgaacgtcgtcgct
cacaagagcggccttacagaggccaaaaatgtagacgccctgcgtgccttcgtcaaggag
caccagcgcgactatgtgcagagcggacgctgcagcgaggcagagcgggacaggatagag
gagcaggtagggaggtacatgcgcagctgcacggccaacattgcgcggctggaggcgagc
ctggggcccgatcagcccggggcacgcggcctgaatccccacatgtttgctcaccggcac
ggcgtggcattgatactcagcgagcggctgcatgcgatcggcagcagctttgactgctgc
agaagtgtgcgctaccagcagctcaaacagcagcagctgcgccagcagcagcagaggcag
cggctcagctctaactcgacagcttacaggccggagtttgacgctcagcagcagagcctg
ccctcaaacctgaaccaggaacagcagcagctcatagaggaggagaacagggcgttggtg
cagcagctcatgagcttgaatcagggcgccaccagcattgagaccaccatgagggagctg
gctaccctgaaccagatgttttcaggccaggtcttccatcaagcacagcagatagagcag
atctacgagcaggcggtgcaagccacaatgaatgtggacaaggggaatgtgcagcttaag
aaagcaatcagggtgggcggctctgcgcgctcgtacctcttctggttcttcgttattgct
gctgccagcctccttttcctggactggttttacagctag
DBGET
integrated database retrieval system
