Coccomyxa subellipsoidea: COCSUDRAFT_42358
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Entry
COCSUDRAFT_42358 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_42358
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
COCSUDRAFT_42358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
HEAT
HEAT_2
Cohesin_HEAT
Cnd1
PDS5
HEAT_EZ
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
17040713
NCBI-ProteinID:
XP_005647270
JGI:
42358
UniProt:
I0YWF7
LinkDB
All DBs
AA seq
1457 aa
AA seq
DB search
MLQHLRRLSEALLKGQAAAAMPLIPLEQHLHLLKALGTYLLQGRDKVVYPDEEDSSEDSM
AILVATEASVACLYMLTSPDMPKQVYQEDIIEAIMDSAKFNLLSNVLSFHDARICAAHRP
QMASGADEDADVGRTSAKKPKSAAKSATKAARRKAARIPEAVGVLAGRLESVVELLGKLL
GVVQLQPNMVLPLLRTACQVLTVEDLHVLQIKSVGLLVAGFKRFKEQRQALLDEVMTGVL
PNLPTGRSSRTFVIGDHSDAAILTVSVELPSLEVEAGALRNCYAPVMHWADVFWTTCLSR
LGGVRAHKADGDADIKYIVEQIATDVFLVHCTPEWPAALPMLLRLITALHSKAGMHCADN
AVRQIAVDLLGFIASQLCYEARRADLDMPAVEEILQEAGPSSTGADPAKQLLLGYLADRR
RGDAELCASAREFMLCQAFADEVTDLQKADASDEDLIFALVKSRETCDVLKRGSSNDLSA
EDACMLVRWVVQSGPLGKGRVPLLKRLADAVDPTKQTAAIRAKAIKAITAAVKMDTSVLG
LSEIEQCVNRALKDDAPSVRQAAVDLLGGHIGNDVKLASAYFDTLVTVSRDTSTSVRKAA
VKILWESCISVPDFPRASEACVAVLHRVADNEESILELVAKIFHGLWFAGSQNASAPTPA
ARAQQLADVSLFVYEAGGSTIHLPLEPSHALVAVLKKALEREAKERPGKEWLAGRELASA
LLEGLLKVGEGAEDAAEQKTFPFLVGLHALCLTDVSLCTPADDASKYIRCLAPYLKVGPS
SKNAQCPKKQAAERREAECLLCILAVVDSILGEIMSVNKALVTELQNDLFVLISKHPFIQ
LLRYGTDAIEATHLPNGKPVTVSDCQTTCLSFFNSSVGDLKVRESALQALGCLGIARPST
LLAPQAQAIMKAALQPSAPTIIKTRALNNLTELLKAEEERLESAQLASDEKQRLGRLGVA
EPAQPLPTQNGESDSLSINNSILQTHWDLVLGLATDATPPQTRAGASADPGDALNASVRR
HAVAVMDAVDRNGLVAPWTALPHLFALTTDPNTEVSARALRIMRRVAEKQPEMFQTCLAS
GLKVTADFHERIRSNYRASTSHSAGVSEEAVRGLGALYMELVQPSRPHRTTFLANLLKPF
DAAATLHFPSSASSDLRLLALCAHVAATLPYKRADEPLVVVYHVNLVVSRRGEDVLSALK
TSLANGGAAAAQEGDVERECRASLALSMLLLLKHHLKSTYGLTTDRIANFNPGTADTRKH
EETRSLGQIPIKPLDLDRLNLDAASESALLQEQYVVFKALMKADSSDYGDGVQLLGRRKS
SKAVAAPAEDNADEDAGEAGGATPALANGNGRMDHMHGSAGPSTAGKPACMEGKRSGRTA
KGRGGRSASRLGTDARCTVTKRRGGSTGGKSGRRKAGRVQISDSEDNDGGGSDDGEEQYL
AARKGAARRRLEPMLVD
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcatctgaggcgtctgtcagaagccttgttgaagggacaggccgcagcagca
atgcccctcattcccttggagcagcacctgcacctcttgaaggctctcggcacctacctg
ctgcagggcagggacaaggtggtgtatccagatgaggaggattcctcggaggattccatg
gccatcttggtggcgactgaagccagcgtagcctgcctctacatgctcacttccccagac
atgccgaagcaggtctaccaggaagacatcatcgaggccatcatggacagcgccaagttc
aatctcctttcaaatgtgctgtcattccacgatgcacgcatctgtgctgcacaccggccc
cagatggcttccggggcagatgaagatgctgatgtggggcgcacctcggccaaaaagccc
aagagcgccgccaagtctgctaccaaagcagccaggaggaaagctgcaaggatcccggag
gctgtgggcgtgttggcaggccggctggagtcagtggtggagctgctggggaagctgctg
ggagtggtgcagctgcagcccaacatggtgctgccgctgctgcgcactgcatgccaggtc
ctcaccgtggaggacctgcatgttctgcagatcaagtctgtagggctgctggtggctggg
ttcaagcgcttcaaggagcagcggcaggcgctgctggatgaggtcatgaccggcgtcctg
ccaaaccttcccacgggccgctcatccaggacatttgtcattggggaccacagcgatgca
gccatccttacggtctctgttgagctgccatctctggaggtggaggccggggccctgcgc
aactgctacgctccagtcatgcactgggcagacgtcttctggacgacctgcctcagcagg
ctgggcggcgtgcgcgcgcacaaggctgatggggatgcggacatcaagtacatagtggag
cagattgcgaccgatgtcttcctggtgcactgcacgccggagtggccggccgctctgccg
atgctgctgcggctgatcaccgcgctgcacagcaaggccggcatgcactgcgcggacaac
gctgtccgccagatcgctgttgacctgctgggcttcattgcctcgcagctgtgctatgag
gccaggcgcgccgaccttgacatgcccgccgtcgaggagatcctgcaagaggccggccct
tcaagcaccggcgctgatccggcaaagcagctgctgctgggctaccttgcggaccggagg
cggggtgatgcagagctgtgcgcgagcgcgcgagaattcatgctgtgccaggcctttgct
gatgaagtcacagacctgcagaaggctgacgcgtccgacgaggacctgatctttgcgctt
gtcaagagccgtgagacttgcgacgtcctaaagcggggctcatccaatgacctgtcagct
gaggatgcatgcatgctggtgcgctgggtggtccagtcaggccctctgggcaaggggcgc
gtgccgctgctgaagagactggcggacgctgtggatcccaccaagcagactgctgccatc
cgggccaaagctatcaaggccatcacggccgcggtgaaaatggacaccagcgtcctgggc
ctctcagagattgagcaatgcgtcaacagagccctgaaggatgatgcaccctcagtgcgg
caggctgctgtggatctcttgggcggccacatcgggaatgacgtgaaattggcatctgct
tacttcgacacccttgtcactgtctctcgagacacctccacctcggtgcggaaggcggct
gtgaagatactgtgggagtcatgcatcagtgtgccagacttccctcgcgcctcagaagcc
tgtgtggctgtgctgcaccgagtggcagacaatgaggagtccatcctcgagctcgtggcc
aagatcttccatggcctctggtttgcaggctcgcagaatgcatcagcgccaacgcctgca
gccagagcgcagcagctggcggatgtgtcgctgtttgtgtatgaggccggcgggtccacc
atccatctgccacttgaaccaagccacgcactggtggccgtcctcaagaaggcgctggaa
cgcgaggccaaggagcggcctggcaaggagtggctggctggaagagagctggcgagcgcc
cttctggaggggctgctcaaggtgggcgagggtgctgaggatgcggctgagcagaagaca
ttccccttcctcgtggggctgcatgcgctgtgcctcacggatgtgtccctgtgcacgccg
gcagacgatgcatccaagtacatccgctgcctggcgccctacctcaaagtggggccctct
agcaagaatgctcagtgccccaagaagcaggcagcagagcggcgggaggccgagtgcctc
ctctgcatactggctgtggtggacagcatcttgggagagataatgagcgtcaacaaagcg
ctggtcacagaactgcagaatgatctctttgtgctcatcagcaagcaccccttcatccag
ttgctgaggtatggcactgatgcaatcgaggcgacccacttgccaaatgggaaacccgtc
accgtgtcagactgccagaccacttgcctctccttcttcaactcctcagtcggggatctg
aaggtgcgcgagtctgcgctgcaagcgctgggctgcctggggatagcgcggccgtccacg
ctgctggcaccccaggcgcaggccatcatgaaggccgctctgcagccctcagcgcccacc
atcatcaagacccgcgccctcaacaacctcaccgagctgctcaaggcggaggaggagagg
ctagagagcgcgcagctggcgtccgatgagaagcaacggctggggcggctgggggtggca
gaacctgcgcagccgctgcccacccagaacggcgaatcagacagcctctccatcaacaac
agcattctgcagacgcactgggatctggtgctgggcctggcgacggacgcaacgcctccg
cagacgcgcgcgggcgccagcgcggatccgggggacgcgctgaacgcgagtgtgcggcgt
cacgcggtggccgtcatggacgccgtagaccgcaacggcctcgtcgccccctggaccgcc
ctaccccacctcttcgccctcaccaccgaccccaacaccgaggtgtcggcgcgggcgctg
cgcataatgcggcgcgtggcggagaagcagccggagatgttccagacctgcctggccagc
ggcctcaaggtcaccgccgacttccacgaacgcatccgctccaactaccgcgcctccacc
tcacactccgccggtgtgtcggaggaggcagtgcgtggcttgggtgcgctttacatggag
ctggtgcagcccagccgcccccaccgcaccaccttcctcgccaatctcctcaagcccttc
gacgcagccgccacgctccacttcccgtcctccgcctcctccgacctcaggctgctggcg
ctgtgcgcgcatgtggcggcgacgctgccgtacaagcgcgcggatgagccgctggtggtc
gtctaccacgtcaacctggtggtctcccgcaggggcgaggacgtcctctccgccctcaaa
acctccctcgccaacggcggcgcagccgctgcacaggagggggatgttgagagggagtgc
agagcttcgctggcgctctccatgctgctgctgctcaagcaccacctcaaaagcacctat
ggcctcacaaccgaccgcatcgctaacttcaacccaggcacagcagacaccaggaagcat
gaagagacgaggagcctgggccagataccaataaagccactggacctcgatcggctgaac
ctggatgctgcctctgaatctgcgctcctgcaggagcaatacgtcgtgttcaaagcgttg
atgaaggccgactcgagcgactacggcgacggtgtccaacttctgggccgcaggaagtcg
tccaaggcggttgctgcacctgcggaagataatgcagacgaggatgcaggggaagcgggg
ggtgccactcctgcacttgcaaatgggaacggccggatggaccacatgcacggctctgcc
gggccctccactgcaggcaagcccgcctgcatggagggcaagcgcagcggcaggacagcg
aaaggccgaggtggacgcagcgcgagccggctgggcacggatgcgcggtgcacggtcacc
aagcgccgtggcggcagcacgggcggcaagagtggccgcagaaaggcggggcgcgtgcag
atatccgacagtgaagataatgacggtggcggctcggacgacggcgaagagcagtacttg
gctgcaaggaagggagccgctcgcaggcggctggagcccatgcttgtggactga
DBGET
integrated database retrieval system