Coccomyxa subellipsoidea: COCSUDRAFT_46149 Help Entry COCSUDRAFT_46149  CDS       T02914                                  Name (RefSeq) DNA/RNA polymerase   KO K02327   DNA polymerase delta subunit 1 [EC:2.7.7.7] Organism csl  Coccomyxa subellipsoidea Pathway csl03030   DNA replication csl03410   Base excision repair csl03420   Nucleotide excision repair csl03430   Mismatch repair csl03440   Homologous recombination Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     COCSUDRAFT_46149    03410 Base excision repair     COCSUDRAFT_46149    03420 Nucleotide excision repair     COCSUDRAFT_46149    03430 Mismatch repair     COCSUDRAFT_46149    03440 Homologous recombination     COCSUDRAFT_46149  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:csl03032]     COCSUDRAFT_46149    03400 DNA repair and recombination proteins [BR:csl03400]     COCSUDRAFT_46149 Enzymes [BR:csl01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      COCSUDRAFT_46149 DNA replication proteins [BR:csl03032]  Eukaryotic type   DNA Replication Elongation Factors    DNA polymerase delta complex     COCSUDRAFT_46149 DNA repair and recombination proteins [BR:csl03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      DNA polymerase delta complex       COCSUDRAFT_46149    MMR (mismatch excision repair)     DNA polymerase delta complex      COCSUDRAFT_46149 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_B CPP1-like DNA_pol_B_exo1 zf-C4pol FAD_syn DnaJ Motif Other DBs NCBI-GeneID:  17044595 NCBI-ProteinID:  XP_005651129 JGI:  46149 UniProt:  I0Z7G6 LinkDB All DBs AA seq 1425 aa AA seqDB search MNCTPLVGMPGQRSMPLSILSPKSAKACTWRSGARLALAQPTRRIARSERLRTSAASSAG EDPYKVLGLSRNANSDAVRRAYNTLVRENRGNDASLARIEEAHSAIMMSQLSARLQGGVT VEKDVKYADRAVYFPWRPRFYKAGKEVVLYSGIAHAVMVAWGLLLQASAGSQPIVACAVI GAGANIYKLQQIFPPGGSSSKNSALKNLLRGAALATLATFLGCFLIFTVPDFLSAQLNRQ MPYWFYESEVSGVVVGKGFRFGYKAAGDTEALESLGAKYGLKVSVVDLVERGATHGSEKE FQNQPPKDGIYIADITFIKNTSEKSYSRYLSPDCHVQKIEAVHRTPIMFYRPKEPTGGSY LKFLFRPGTNVKKAAASILSIASKNSLRPHNLLWQDKAQFEHEVGLLQRFLVDAPISGGA WVHLPPQIRPEPGYTRVSDGERQSECDIEVTAPWKQLQCLTPDATQLALGREWSPTRYKA PGEDKVSEEWCAALEVARQGQIAKLNMLTLDVIMAPKDGVDRVPVPSKDPIMCIANSLYS SDDVASQRFAPAQDMSDDGAFGEDGMDDAEGPVIVDLTTTEGHTPQVPVPSAREGGAAVF TWSPGVRAHTVRQVSPRGVTRMHVHPSEEAMLQAWLQWLRKADPDILNVFQVRDTLGALA ERFTALKLNSGGLHLSRLKRMHGKALALKRIVMYSPAWVKSQNRMASTSNQETFRVEHME GRVVLDVLRHALTACNLASFSLVDCCQSLLSRRMEVLPPSAITRLSSLSNPARSKGEQAA DRARLASYAADRVGVVRALLQRLATLPEAIEIGRVTGLTLGQVLYNAQMIRTWSLLLRNA QRSGYIVSGRQDALPLSESPYLMHPVETKNVGLYQSPVAILDFASLYPSLYRAYNLCYTT LLHPDDSNAFVPEHVTVTPTGDVYVKPEIRKGILPSILAALINARAATRAALKEATSPAQ MAVLDSRQKALKLTANALYGFTGAQASPLQCVPLADSCLALGAQSCRRAIELLTEAFQKG VFGSKDAKVIYGQTDSLFINFRSSTTAEAMQLGRAAAKYVSSNFPEHMELKFEKVAQPFM LLHVNRYAGRAFESEDEVQEGKGVLMVKGLKSMWRQAPPIVRNTLQGVLARIILQEDVRG AVEYAEGQIRRLLSGQVELWELPLTGGLWRVTGAQVAQAAAAEGAPGPAAAAVSEEEVRG PHASLAVRLQQRDPGRTFVLGERLSYVLLPGARTQDDAAEDPLTAAKAGCSADYELYWQN KLRKPLAEILATCLSASQIQEVLNGPHTRVRVDTVAAAQVSPPGKKAKGGRQMGLASFYR GTVKCLACRRPVHSTGGNSEDGPALCEDCAVEDGVREGVLLELLGEQRRLEQRNCTANSL CMNCHSGGLTGKVLCENGECPVLYARLSTAAKLNSLDHSFRRLDW NT seq 4278 nt NT seq  +upstreamnt  +downstreamnt atgaactgcactccattggtaggaatgcctgggcagcgttccatgcctttatccattttg agtccgaaatctgcaaaagcatgtacttggagatcaggtgcgcgattggcccttgcgcaa cccactcgacgcatcgcacgcagtgagagactgcgcacaagtgctgccagctcagctgga gaagatccttacaaggtgcttggcttgagcagaaatgcaaattcggacgcagtgagaaga gcatacaatacattggttagagaaaaccgagggaatgatgcttccttggctagaatagag gaggcccactcagccatcatgatgtcgcagctctcagcaaggctgcagggcggtgtcacg gtggagaaggacgtcaaatatgcagacagagctgtatactttccttggcggcccaggttt tacaaggccggcaaggaggtcgtcctgtactctggcattgcgcatgcggtgatggtggcg tggggacttctgctgcaggcgtcagcaggcagccagcctattgttgcatgtgcagtcatc ggagcaggggcaaacatctacaagcttcagcagatctttcctccaggcggctccagcagc aaaaactcagccttgaagaacctgttgcgaggagcagctcttgcaacgctggcaacgttc ctcgggtgcttcttgatcttcacagtgccagacttcctgtcagcgcagctgaaccggcaa atgccctactggttctatgaaagcgaggtatcgggggttgtggtgggaaaggggttcaga tttggctacaaagctgccggggacactgaggcgctggaatctttgggggccaaatatgga ttgaaagtgtctgtagtggatctagtagagcgcggtgcgacgcatggcagtgagaaggaa ttccaaaatcagccacccaaggacggcatctacattgcggatatcaccttcattaagaac acgtctgagaagtcctactcaagatacttgagtccggactgccatgtccagaagattgag gctgtgcacaggaccccaatcatgttctatcggccaaaggagcccacggggggatcctac ttgaagtttctgttcaggcctggaaccaatgtgaagaaggctgcagcgtctatcttgtcc attgccagcaagaattcgctgcggcctcacaaccttctctggcaggacaaggcgcaattt gagcatgaagtggggctccttcagcgattccttgtggatgccccaatatcaggaggtgcg tgggtgcatttacctcctcagataagacccgagcctggctacaccagagtgtctgatggg gaacggcagtctgagtgtgacattgaagtcactgcgccgtggaagcagctgcagtgcctg acgccagatgcaacacagctggccttggggcgggaatggagcccaacacgttacaaggca cctggggaggacaaggttagcgaggaatggtgtgcagccttggaggtggctcgccagggt cagattgccaagctgaatatgctcacactggacgtgatcatggcaccaaaagacggagtc gacagggtgccggtgccctcaaaggatcccattatgtgcatcgccaacagcctctacagc tccgatgacgtggcgtcccagcgctttgccccggcgcaagatatgtctgacgatggggcc tttggagaggatggcatggatgacgctgaggggcctgtaatcgtggatctgacaaccacc gagggccacaccccacaggtgccagttcccagtgcaagggagggtggggcggcagtattc acgtggagccctggggtgcgggcgcacacagtgcgacaggtgtcgcccaggggcgtgacg cgcatgcatgtgcacccttccgaggaagccatgctgcaggcctggctgcagtggctgcgc aaggccgacccagacatcctcaatgtgttccaggtgcgtgacacattgggggcgctggca gagcgattcacagcgctgaagctgaacagtggcggactgcacctgtcgcgcctcaagcgc atgcacggcaaggccctggcgctcaagcgcatcgtcatgtactctccagcctgggtgaag agccagaaccgcatggcctcaacctccaaccaggagactttcagggtggagcatatggag gggcgggttgtgctggatgtgctgcggcatgcgctgaccgcctgcaacctggccagcttc agcctggtggactgctgccagagcctgctcagccgccgcatggaggtcctgccaccttcc gccatcacccgcctctcatcgctcagcaaccccgccagaagtaagggggagcaggcggcg gaccgggctcggctggcttcgtatgccgctgacagagtgggggtggtgcgggcgctgctc cagcggctggctacactgccggaggcaattgagatcgggcgtgtcactggactcaccctc ggacaggtgctgtacaacgctcaaatgatccgcacttggagcctgctgctgcgaaatgcc cagcgctcgggctacattgtgagcgggcggcaggatgcactgccgctcagtgagagcccg tacctgatgcatccagtggaaacaaagaacgtcggcttgtaccagagccctgtggccatc ctggactttgcctcgttgtacccttccctgtacagagcctacaacctctgctacacgact ctgctgcatccagatgactccaatgcctttgtgcctgagcacgtcacagtcacccccaca ggcgacgtttatgtcaagcccgagatccggaaaggaatcctgccctcaattcttgccgcg ctgatcaatgctcgggccgccacaagagcagcactgaaggaggcgacaagtcctgcgcag atggcagtgcttgacagccggcagaaggccctcaagctgacggccaacgccctgtacggc ttcacaggtgctcaggcctcaccgctacaatgcgtgccgctggcagattcctgcttggcc ctgggtgcacagtcctgccgccgcgcgatagagctgctgactgaggcgtttcagaagggt gtgtttgggagcaaggatgccaaggtcatttatggccagacagactccttgttcataaac tttaggagctccacaactgcggaggccatgcagttggggagggcagctgcaaagtatgtc agctccaatttcccagagcacatggagctgaagtttgagaaagtggcacagcctttcatg ctgctgcacgtcaacagatatgctggaagggcgttcgagagcgaggatgaggttcaagag gggaagggagtactgatggtgaaaggcctcaagtccatgtggcgccaggccccacccatt gttcgcaacacgctgcagggcgtcctcgccagaataatcctgcaggaggatgtgaggggt gcagtggagtatgcggaggggcagatccggcggctgctgagcggccaggtggagctgtgg gagctgcccctgacgggcggcctgtggcgggtgacgggtgcgcaggtcgctcaggccgcc gccgccgagggggccccggggccggccgccgccgctgtgagcgaggaggaagtcagaggg ccccacgcctccctggcagtcaggctgcagcaacgagatcccggccgcacatttgtgctg ggggagcgcctgtcatatgtgctgctgccgggcgcgcgcacccaggacgatgcagccgag gaccccctcaccgctgccaaggccggctgctcggccgactacgagctgtactggcagaac aagctgcgcaagcccctcgcagagatcctcgccacgtgcctgtccgcatctcagatccag gaagttctcaatggcccccatacacgggtgcgagtggacacagtggcggctgcgcaagtg tcacccccgggaaagaaggccaagggtggccggcagatgggcctggccagcttctacaga ggcactgtaaaatgcctagcctgcagacgacctgtgcacagcactggcggtaactcggaa gatgggccggcgctttgtgaggactgcgcagtcgaggatggggtcagggagggagtcctg ctggagctgctgggggagcagcgccgcttggagcagcgcaactgcaccgccaactccctc tgcatgaactgccacagcggcggtctcaccgggaaagtcttgtgcgagaatggggagtgc ccggtgctgtacgcgcgcctctcaacggccgcaaagctcaatagcctcgatcattctttc aggcgcctggactggtga

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