Coccomyxa subellipsoidea: COCSUDRAFT_46608
Help
Entry
COCSUDRAFT_46608 CDS
T02914
Name
(RefSeq) TFP11-domain-containing protein
KO
K13103
tuftelin-interacting protein 11
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_46608
Spliceosome [BR:
csl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
COCSUDRAFT_46608
Other components
Complex C specific factors
COCSUDRAFT_46608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Motif
Other DBs
NCBI-GeneID:
17043151
NCBI-ProteinID:
XP_005649692
JGI:
46608
UniProt:
I0Z3C9
LinkDB
All DBs
AA seq
862 aa
AA seq
DB search
MAKQSNMEEDQQYERFDMDNDFEGGQWVGGEYFYTEKKRNRRQTKEEHLYGYESEQSDED
RPRRGKGPRKAADYTRPVGFVSSGVVKSTEEKPEDVETAEHAEEDKGMRNGLGAQQNGTG
LGFPGHSISAGMGFRPAKEPQIQLDFEEDDGVVLPTSFGKSVKQAAEERLKEKKRREKEK
KKASSSRVTSANGAPSVGEFERHTKGIGAKLLAGMGYKEGEGLGRNRQGISKPIEVKLRP
KGMGMGYNDYEEHKLIPDEKPAEEPVEKAKEEAVDVKLWRKRHAAARVKREFRTADEVLQ
EAAEKPAGAARQTILDMRGPQARLVTNLEHLNVMDEEATGGDLVPMPELQHNLRLLVDLA
EADIQRIDGKLRQEKDTAVILGREQARLQEEVEVARRQVAQASHVLQEVSRCQATDARLS
LADIGRTYAALRSGYWEEYLMYNLAAAALSQVLPRFTALLADWQPLEEPVRGLQELSSWR
PLLESDSQRDAIFQDVGDDPYTRLLSAVVLPRLAGAITNAWEPRDPEPPLRFLEQWADVL
PTSVQRHILDTLILPKLSRAVQAWEPREERVPLHAWLHPWLEMLGPQLEDLYPTIRFKLA
SALQAWHPSDASALALLSPWHKVFEPKEWAALIGRSILPKLAYTLDADFAVNPVAQDLTA
WQWVMSWAGVLPRQQLISLLEDHFFPKWHAVLQHWLAHAPDYDEVTAWYLGWKGMLPAEA
QDHERIRAHLNSAINAMNSAVHGIPLQYSQPASAAAAGAGYGYAGAAGVVPTTGYAEPNM
YDSSRAQEPSMRQLVENFAQENGVVFLPKSGRRHEGLQVYGFGGVSCVIDSSAGLVRAHI
GGQWVLTGLEELLKEVRKRQKL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaagcaacatggaagaggatcagcagtatgagagatttgacatggataat
gattttgagggaggccagtgggttggaggtgaatatttctacacagagaagaagcgaaat
cgcaggcagacgaaggaggagcacttgtatggatatgagagcgagcagagcgatgaggac
aggccaagacgtggaaaaggtcctcgcaaagccgcagattacaccagaccagtcggcttt
gtgtccagcggagtggtgaagagcactgaagaaaagcctgaggatgttgagactgctgag
catgccgaggaagataaagggatgcgaaatggcttgggagcgcagcagaacggtacagga
ctggggttccctgggcacagcatcagcgctggcatgggcttcaggccagccaaggagcct
cagatacagcttgattttgaggaagatgatggagttgtgctgccaacctcctttggaaag
agtgtgaagcaagcggcagaggagagactgaaggagaagaagaggcgagagaaggaaaag
aagaaagcatccagctccagggtcacaagcgcgaatggcgcaccatcagtcggagaattt
gagcggcacaccaaaggcattggagccaagctgctggccggcatgggctacaaggaagga
gaggggctggggcgcaacagacagggcattagcaagcccatcgaggtcaagctgcgtccc
aagggcatgggcatgggctacaacgactacgaggagcacaagctgatccccgatgaaaag
cctgccgaggagcctgttgagaaggcaaaggaggaggcagtggacgtgaaactgtggagg
aagaggcatgcagctgcgcgggtcaagcgagagttccgtaccgctgatgaggtgctgcag
gaagctgccgagaagcctgcaggcgccgctcggcagaccatcctcgacatgcgcggccca
caggcgcggcttgtgacaaacctggagcacctgaatgtgatggatgaggaggcgaccggt
ggcgatctggtgccgatgccggagctgcagcacaacctgcggctgctggtggacctggca
gaggcggacatccagcgcattgacggtaagctgcgccaggaaaaggacacagcggtgatc
ctgggccgggagcaggcgcggctgcaggaggaggtggaggtggcacggcgccaggtggcg
caggcgtcgcacgtgctgcaggaggtgtcgcgctgccaggccaccgacgcgcgcctgtcg
ctggccgacatcggccgcacctacgccgcgctgcgctccggctactgggaagagtacctc
atgtacaacctggccgctgctgcgctctctcaggttttgcctcgcttcactgcgctgctg
gcggactggcagccgctggaggagcctgtgcggggcctgcaggagttgtcaagttggcgg
ccgttgctggagtctgactctcagagggatgccatcttccaggatgttggagatgacccc
tacacgcggctactgtcagcggtggtgctgccgaggctagcaggtgcaattactaacgct
tgggagccacgcgatccggagccgccactgcgcttcctggagcagtgggcggacgtcctc
cccaccagcgtccagcgccacatcctggacactctcatactgccaaagctgagccgggcg
gtgcaggcgtgggagccgcgggaggagcgtgtgccgctgcatgcgtggctgcacccctgg
ctggagatgctggggccgcagctggaggacctctacccaaccatccgcttcaagctcgcc
tccgcgctgcaggcctggcacccctccgacgcgtcagccctcgccctgctatccccctgg
cacaaggtgtttgagcccaaggagtgggcggcgctcatcgggcgctccatcctgccgaag
ctggcgtacacgctggacgcggattttgcggtcaacccggtggcgcaggatctgacggcg
tggcagtgggtgatgtcgtgggccggcgtgctgccgcggcagcagctgatcagcctgctg
gaggaccacttcttccccaagtggcacgccgtgctgcagcactggctggcccatgcccca
gactacgacgaggtcaccgcctggtacctcggttggaagggcatgttaccagcagaggcg
caggaccacgagcgaatccgcgcgcacctcaattcggcgatcaatgccatgaacagcgcg
gtgcatggcattcccctgcagtactcgcagccggcttcagccgccgccgctggagccggc
tacggatatgccggggccgcaggggtagtgccaacaacaggctatgcagagccgaatatg
tatgatagctccagggctcaagagccttcgatgcggcagctggtcgaaaatttcgcgcag
gagaatggtgtggtgtttctacctaagtctgggcgccggcatgagggcctgcaggtgtac
gggtttggcggcgtcagttgcgtgatagattcatcagcagggcttgtgagggcccatata
gggggtcaatgggtgctcacaggcctggaagaactcctcaaagaagtgagaaagcgccag
aaattgtag
DBGET
integrated database retrieval system