Coccomyxa subellipsoidea: COCSUDRAFT_46693
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Entry
COCSUDRAFT_46693 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K03260
translation initiation factor 4G
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_46693
03012 Translation factors [BR:
csl03012
]
COCSUDRAFT_46693
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
COCSUDRAFT_46693
mRNA cycle factors
Stress granule specific factors
COCSUDRAFT_46693
Translation factors [BR:
csl03012
]
Eukaryotic type
Initiation factors
eIF-4
COCSUDRAFT_46693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
CNOT1_CAF1_bind
DUF7177
Motif
Other DBs
NCBI-GeneID:
17043381
NCBI-ProteinID:
XP_005649923
JGI:
46693
UniProt:
I0Z410
LinkDB
All DBs
AA seq
654 aa
AA seq
DB search
MEQLVLRPGGAGPNKNPFAGFGRGAGASLPKKICMSSPPELAGQQELLLDAPGTTKPAES
VDAQLPRQAEQPDTRDWHTRKELPPAPENQREGQQQQPVQQWAQGPSPAQQSNGPAPKIQ
RAADVGKKAWMPGTTTGGQEKATRQVKGILNKLTPENFDRLLQQVLDIVNDAEVLHSTIS
LVFENAVAQPTFAFMYAQLCDRLSKALQTTPDGEREIAERKVKMRTLGNIRLIAELYKQE
VVSEKILHACIQQMLGDGKSDPAEDDVEAMCEMLTVVGKKLEEVTKDKKRLDGYFAILEK
WAKNKALSARVKFMIRDIVELRKSKWVPRRQKEEAKKISEIHAAAHAELGMIPSAVLPGL
APLPAHSRGAVPGLADDVELFPAFKGDDDGWETVGRKKGSAKIGDQSHTSAFLGEYTPVA
AARSAPAAAAAPAAPAPVAAAPAAAAAPAPRAKKVYTDEERESQAKSLFSEFLSAGDHVE
ALTLARELAAPGFMPKLVDMGIDALFETIRPKEHEMLTDLLVSLLRRNAYSLEDFVTGVK
LKTDLLEDLALDVPKAPKLLGSLVGLAVAEGAVPAGKLVELYEKVEDTETRRRGVAEALR
YVKGKVGEAKLGQLCTEGGLQVEKFLAADVEFDGPDFQDVAAFLKQEGLSAVPL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcgttctgaggccaggtggtgctgggccaaacaagaatccttttgcagga
ttcggtcgtggggctggagcatcattgcccaagaagatatgtatgtcttcacctccggag
ctagcagggcagcaggagctgctcttggatgctcctggtaccaccaagcccgcagagtcg
gtggatgcacaactgccgcgccaagctgagcagccagatacacgtgactggcacacgcgg
aaagagctgcctcctgccccagagaatcagcgggagggacaacagcagcagcctgtgcag
cagtgggcacaagggccttcaccagcgcagcagtccaacggaccagctcccaagatccag
agggcagcagacgttgggaagaaggcctggatgccaggcacaacaaccggcggccaagaa
aaggcgacgcggcaagtgaagggcattctgaacaagctcacgccggagaactttgaccgc
ctgctgcagcaagtccttgacattgtgaacgacgcagaagtcctgcattccaccattagc
cttgtctttgagaatgcagtggcacagcccacctttgccttcatgtacgcgcagctttgt
gatcgcctgtccaaggcgctccagacgactccagatggggaaagggaaatcgcagagcgg
aaggtgaagatgaggacactgggcaacattaggctcattgcagagctgtacaagcaggag
gttgtcagcgagaaaatcctgcatgcctgcatccaacagatgcttggcgacggcaaatct
gatcctgctgaggacgatgtggaggcaatgtgcgagatgctgaccgttgtgggcaagaag
ttggaggaggtgacaaaggacaagaagcgcctggatggatactttgccatcctggagaag
tgggccaagaacaaggcgctgtcggcgagggtgaagttcatgatccgggacatagtggag
ctgcgcaagtccaagtgggtgccgcggcgccagaaggaggaggccaagaagatcagcgag
atccacgccgccgcgcatgccgagctgggcatgatcccctccgccgtcctgcccggcctc
gcgccgcttccggcccactcccgcggcgctgtgcccggcctcgccgacgacgttgagctc
ttcccagccttcaagggcgacgatgatggctgggagacggttggccggaagaaggggtcg
gccaagattggcgatcagagccacacgagtgcgttcctgggtgaatacaccccggtcgca
gccgcgcgctccgcgcctgccgcagccgccgccccagctgctccggcccccgttgccgcc
gctcctgctgctgctgctgcgcctgcacccagggcaaagaaggtgtacacagacgaggag
agggaatcgcaggcgaagtctttgttcagtgagttcctgtctgctggagaccatgtggag
gctctcacactcgcgcgggaactggctgcacccggcttcatgcccaagctggtggacatg
ggcatcgacgcgctgtttgagaccatcagaccaaaggagcacgagatgctgacggacctg
ctggtgtccctgctgcgccgcaacgcatactcgctggaagacttcgtcaccggtgtgaag
ctcaagacggacctcctggaggacctggcgctggatgtgccaaaggcgccgaagctgctg
gggtcgctggtggggcttgcagttgcagagggagctgtgccggcagggaagctggtggag
ctgtatgagaaggtggaggacacagagaccaggcgacgaggcgttgcagaagccctgcgc
tatgtcaagggaaaagttggggaggcaaagctgggacagctgtgcacagaaggagggctg
caggtggagaaattcctggcagctgatgtggagtttgatggccctgactttcaagatgtc
gccgcttttctgaagcaagaaggcctgagtgctgttcccttgtga
DBGET
integrated database retrieval system