KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_46701
Entry
COCSUDRAFT_46701  CDS       T02914                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14791  periodic tryptophan protein 1
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_46701
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    COCSUDRAFT_46701
  Pre-60S particles
   Other pre-60S particles
    COCSUDRAFT_46701
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_WDHD1_1st WD40_RFWD3 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR19_1st Beta-prop_TEP1_C ANAPC4_WD40 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_SCAP WD_LRWD1 Beta-prop_EML Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_DCAF12 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 17043398
NCBI-ProteinID: XP_005649940
JGI: 46701
UniProt: I0Z427
LinkDB
AA seq 512 aa
MISALCWIAREAAKDVPVLSEPTEEELKELKEAALAGAGDEDDDEIDADEEDTSDDEDMD
EAAQVEKAKAMAEMLRPSGGGNEDAKASTSAGLGNIDAAMAELDMEHYDDEEGDVPGLFG
TGKHPGMAYHSRAEDDPYLAKDISDSDDEELTLKKTDFLILAARNEDDVSHLEVWVYEDM
DETGESNLYVHHDIILPAFPLSLAWMDCNLADTTATANLAAVGSISPAIEIWDLDVLDAV
EPLVTLGGEAPAASTADGSASEGAAIKKKKKKSKKKGLSVKEGSHEDAVLGLSWNRDFRN
VLASASADKTVKVWDVASQQCQHTLTHHKGKVQAVAWNPAEAPVLLSGAFDKVAALADVR
VPDGQPLTWKVSADVEALTWSPHAPTTFLVSSEDGLVSAYDARGGAGSEPLFRLAAHDAA
TCALSFNPAAPNLLATASTDNMVKLWDVADNKPSLVAAQDLKVGACFTAAFCREAPWLLA
AAGAAGTVAVWDVLTNAAVSNRYNKHLRRQTA
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgatctcggccttgtgttggattgctcgagaagctgcgaaggatgttccagttctaagt
gagccgacggaagaagaattaaaggaattgaaagaggcagctctggccggagcaggagat
gaggacgatgatgagatcgatgccgacgaggaggacacgtctgacgatgaggatatggac
gaggcagcgcaggttgagaaagctaaagcaatggcagaaatgctcaggccctctggagga
ggcaatgaggatgccaaagcaagcacttctgcagggctcggcaacattgatgctgctatg
gcagagctagacatggagcattatgatgatgaggaaggagatgtgcccggtctgtttggg
acgggcaagcatcctggcatggcgtaccacagcagggctgaggatgatccctacctggca
aaggacatttctgatagcgatgacgaggaactcaccctaaaaaagacagacttcctcatt
ctggctgccaggaatgaggatgatgtcagccacctggaggtctgggtgtatgaagacatg
gacgagacaggagaatcgaatctctatgtgcaccatgacatcatcctgccagcgttccct
ctctctttggcgtggatggactgcaatcttgcagacacaactgcaactgccaatcttgca
gcggtgggaagcatcagtccagcaattgagatctgggacttggatgtcttggatgcagtg
gagccgctggtaactcttggtggggaggcgccagctgccagcacagcagatggatcagcc
tctgagggcgcagccataaagaagaagaagaagaagtccaagaagaaggggctgagtgtg
aaggaggggagccacgaggatgcggtgttgggcctctcctggaacagggacttcagaaat
gtcctggccagcgcaagcgcagataagactgtcaaggtgtgggatgtggcgagccagcag
tgccagcacacactgactcaccacaagggcaaggtgcaggcagtggcatggaaccccgct
gaggcccccgtcctgctgtctggcgcctttgacaaggttgctgcgctggcggacgtgcgc
gtgccggatgggcagccgctgacgtggaaggtgagcgctgacgtggaggcgctgacgtgg
tcgccgcacgcgcccaccaccttcctggtgtcctcggaggacggcctggtgtcggcgtac
gatgcgcgcgggggggccggctcggagccgctgttccggctggccgcgcacgacgccgcc
acctgcgcactgtccttcaacccggccgcgcccaacctgctcgccaccgcctccaccgac
aacatggtgaagctgtgggacgtggcggacaacaagccgtcgctggtggcagcgcaggac
ctgaaggtgggtgcctgcttcacagccgccttctgcagggaggcgccctggctgctggct
gctgctggagctgcagggacggtggcggtgtgggatgtgcttactaatgccgcggtcagc
aaccgctacaacaagcatctcagaaggcagacagcttga

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