Coccomyxa subellipsoidea: COCSUDRAFT_46701
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Entry
COCSUDRAFT_46701 CDS
T02914
Name
(RefSeq) WD40 repeat-like protein
KO
K14791
periodic tryptophan protein 1
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_46701
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
90S particles
Other 90S particles
COCSUDRAFT_46701
Pre-60S particles
Other pre-60S particles
COCSUDRAFT_46701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
17043398
NCBI-ProteinID:
XP_005649940
JGI:
46701
UniProt:
I0Z427
LinkDB
All DBs
AA seq
512 aa
AA seq
DB search
MISALCWIAREAAKDVPVLSEPTEEELKELKEAALAGAGDEDDDEIDADEEDTSDDEDMD
EAAQVEKAKAMAEMLRPSGGGNEDAKASTSAGLGNIDAAMAELDMEHYDDEEGDVPGLFG
TGKHPGMAYHSRAEDDPYLAKDISDSDDEELTLKKTDFLILAARNEDDVSHLEVWVYEDM
DETGESNLYVHHDIILPAFPLSLAWMDCNLADTTATANLAAVGSISPAIEIWDLDVLDAV
EPLVTLGGEAPAASTADGSASEGAAIKKKKKKSKKKGLSVKEGSHEDAVLGLSWNRDFRN
VLASASADKTVKVWDVASQQCQHTLTHHKGKVQAVAWNPAEAPVLLSGAFDKVAALADVR
VPDGQPLTWKVSADVEALTWSPHAPTTFLVSSEDGLVSAYDARGGAGSEPLFRLAAHDAA
TCALSFNPAAPNLLATASTDNMVKLWDVADNKPSLVAAQDLKVGACFTAAFCREAPWLLA
AAGAAGTVAVWDVLTNAAVSNRYNKHLRRQTA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggccttgtgttggattgctcgagaagctgcgaaggatgttccagttctaagt
gagccgacggaagaagaattaaaggaattgaaagaggcagctctggccggagcaggagat
gaggacgatgatgagatcgatgccgacgaggaggacacgtctgacgatgaggatatggac
gaggcagcgcaggttgagaaagctaaagcaatggcagaaatgctcaggccctctggagga
ggcaatgaggatgccaaagcaagcacttctgcagggctcggcaacattgatgctgctatg
gcagagctagacatggagcattatgatgatgaggaaggagatgtgcccggtctgtttggg
acgggcaagcatcctggcatggcgtaccacagcagggctgaggatgatccctacctggca
aaggacatttctgatagcgatgacgaggaactcaccctaaaaaagacagacttcctcatt
ctggctgccaggaatgaggatgatgtcagccacctggaggtctgggtgtatgaagacatg
gacgagacaggagaatcgaatctctatgtgcaccatgacatcatcctgccagcgttccct
ctctctttggcgtggatggactgcaatcttgcagacacaactgcaactgccaatcttgca
gcggtgggaagcatcagtccagcaattgagatctgggacttggatgtcttggatgcagtg
gagccgctggtaactcttggtggggaggcgccagctgccagcacagcagatggatcagcc
tctgagggcgcagccataaagaagaagaagaagaagtccaagaagaaggggctgagtgtg
aaggaggggagccacgaggatgcggtgttgggcctctcctggaacagggacttcagaaat
gtcctggccagcgcaagcgcagataagactgtcaaggtgtgggatgtggcgagccagcag
tgccagcacacactgactcaccacaagggcaaggtgcaggcagtggcatggaaccccgct
gaggcccccgtcctgctgtctggcgcctttgacaaggttgctgcgctggcggacgtgcgc
gtgccggatgggcagccgctgacgtggaaggtgagcgctgacgtggaggcgctgacgtgg
tcgccgcacgcgcccaccaccttcctggtgtcctcggaggacggcctggtgtcggcgtac
gatgcgcgcgggggggccggctcggagccgctgttccggctggccgcgcacgacgccgcc
acctgcgcactgtccttcaacccggccgcgcccaacctgctcgccaccgcctccaccgac
aacatggtgaagctgtgggacgtggcggacaacaagccgtcgctggtggcagcgcaggac
ctgaaggtgggtgcctgcttcacagccgccttctgcagggaggcgccctggctgctggct
gctgctggagctgcagggacggtggcggtgtgggatgtgcttactaatgccgcggtcagc
aaccgctacaacaagcatctcagaaggcagacagcttga
DBGET
integrated database retrieval system