Coccomyxa subellipsoidea: COCSUDRAFT_46938
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Entry
COCSUDRAFT_46938 CDS
T02914
Name
(RefSeq) DNA repair exonuclease
KO
K10865
double-strand break repair protein MRE11
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03440
Homologous recombination
csl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCSUDRAFT_46938
03450 Non-homologous end-joining
COCSUDRAFT_46938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csl03032
]
COCSUDRAFT_46938
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_46938
DNA replication proteins [BR:
csl03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
COCSUDRAFT_46938
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
COCSUDRAFT_46938
BRCA1-C complex
COCSUDRAFT_46938
NHEJ (non-homologous end-joining)
MRX complex
COCSUDRAFT_46938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
17042781
NCBI-ProteinID:
XP_005649324
JGI:
46938
UniProt:
I0Z2B1
LinkDB
All DBs
AA seq
790 aa
AA seq
DB search
MGGESWRNKWQATMLSEGEEQEPKALIQEGRCEAAMQNSRGVWEKDEIRKDDSFVTFEEI
FDQATREKVDFVLLGGDLFHDNKPSRTTLVRTMEILSKYCLNGSQVLFKIISNPTENFVS
GKANFKNDNYSVGLPVFTIHGNHDDPSGVDNLSAVDVLSTCNLVNYFGKSQLEGSTIGKL
EIVPVLLQKGTTKIALYGLGNIRDERLARAFQTPGSVDWRQPKVTPQYPADEWFNIFVLH
QNRVTRGQGAKNAIKEDYLPSFLDLVIWGHEHKCIPEPVAAESDKTFSILQPGSSVATAL
SEGEAKKKHVVVLEFLGEQWRTFKYPLRTVRPFTFDQIVLGDQQGLDPEKPEDVAAVIER
KVAGMIAAAGVRSAAAGARSAAAGAEDAARLKLPLVRLRVDYTGFSTINAQRFGQKFVGR
VANPHDMLLFHKAAARKAKPEVGDGEVSEADLRPEALDQQRVEQLLAEHLPENNVAIITR
NEFTEALRDFVDKEEKAALAECVNKALAYSQSTAVQNGGTDKDEDIAVLLASSMKERRES
QAAATPRQEPAAPRALGAAAAVRSNADLDLDDDDEAPSTSAMPPPPPQGRRRAAPTASRA
GSHAPGAARGRRQATLGESFARGTPSQAEDGVIATQRSVASRGRKASPAQRPARKAATGA
RARMNEIRESEDELSGSDAADDIDEVDLIEDSDGEVDLLDEEPAPKRKRAAQGTLPVKRA
KKEGPAQARASGDKRAAAGPVKGSFVEDSDSDAEAVPVTGRFGRRRLNMAGGGSAQQPSQ
VSGRAWSAAR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgaaagctggcgcaacaaatggcaggcaaccatgctgtctgagggcgaagaa
caggagcccaaggctctcatccaggaaggccgctgtgaagccgccatgcaaaactctcgg
ggcgtatgggagaaggacgagataaggaaggacgactcctttgttaccttcgaggagatc
tttgatcaggccacacgggagaaggtggactttgtgctgcttgggggcgatctgttccat
gacaacaagcccagtaggactacattggtgcggacaatggagattctcagcaagtactgc
ctgaacggcagccaagtgctgttcaaaatcatcagcaatccgactgagaatttcgtcagc
gggaaggcaaattttaaaaatgacaactacagtgtcggcctgccggtgtttacaatccat
ggcaaccatgacgacccctccggcgtcgacaacctgtctgctgtggacgttctgtccaca
tgcaaccttgtcaattactttggcaaatcgcaattggagggctccacgatcggcaagctg
gaaattgtgccggtgctgctgcagaagggaacaacgaagattgccctttatggcctgggc
aatatccgagatgagcgcctggcgcgcgcattccagacccccggcagcgtcgactggcgg
cagccaaaggtgactccccagtacccggcggacgaatggttcaacatctttgtgctgcac
cagaaccgggtgacacgtggccaaggggccaagaacgcgatcaaggaggactatctgccc
tccttcctggatctggtcatctggggccatgagcacaagtgcatccccgagccagttgcg
gcagagtcagacaagaccttcagcatactgcagcctgggtcgagcgtagccacagccctg
tcggagggggaggcaaagaagaagcatgtggtcgtcctggaattcctgggggagcagtgg
cgcaccttcaagtaccccctgcgcaccgtccggcccttcacctttgaccagatcgtgctc
ggagaccaacagggcctggacccagagaagccggaggacgtggcggcggtgatagagcga
aaggtggccggcatgatagcggcggccggggtgcgatcggccgcggccggggcgcgatcg
gccgcggccggggccgaggacgcagcgcgcttgaagctgccgctggtgcggctgcgcgtg
gactacaccggcttctcaacaatcaacgcgcagcgcttcgggcagaagtttgttggccgc
gtcgccaatccccacgacatgctgctcttccacaaggctgccgcgcgcaaagccaagcct
gaggttggggatggggaggtcagcgaggcggatctgcggccagaggcgctggaccagcag
cgagtggagcagctcctggcagagcacctgcctgagaacaacgtggccatcatcacgcgc
aacgagttcaccgaggccctgcgcgacttcgtggacaaggaagagaaggcggcattggcg
gaatgcgtgaacaaggcactggcgtactctcagagcacggcggtgcagaacggcggcact
gacaaggatgaggacattgcggtgctgctggccagcagcatgaaggagcggcgcgagtcc
caggcggcggcgacgcctcggcaggagccggccgcgccgcgcgctctgggcgctgcggcg
gctgtgcgctcaaatgctgacctggatctggacgacgatgacgaggcgccgtccacgtca
gccatgccgccacctccgcctcagggccgcagacgcgccgcgccaaccgcctccagagca
ggctcgcatgcgccgggagcggctcgagggaggcggcaggcgaccctgggtgagagcttt
gctcgtggcacgccctcacaggcagaggatggggtaattgcaacacagcgcagcgtggcg
tcccgggggagaaaggcctcgcctgcacagcggcctgcgcgcaaggccgccaccggagca
cgcgcgcgcatgaacgagatcagggagagcgaggacgagctgagtggcagtgacgcagcc
gatgatattgatgaggtggacctgattgaggattccgacggggaagtagatttgctagat
gaggagccagcacccaagcgcaagcgtgccgcccagggcaccctcccggtgaagcgtgca
aagaaagaggggccagcgcaggcgcgagcgtctggggacaaaagggcggcggcaggccct
gtgaagggcagctttgtggaggactctgactccgacgccgaggctgttcccgtcaccggg
cgctttggccgccgccgcctgaacatggctggaggaggcagcgcccaacagccatcacag
gtttctgggcgggcgtggagtgctgcacgatga
DBGET
integrated database retrieval system
