Coccomyxa subellipsoidea: COCSUDRAFT_46955
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Entry
COCSUDRAFT_46955 CDS
T02914
Name
(RefSeq) hypothetical protein
Organism
csl
Coccomyxa subellipsoidea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_9
PAS_4
PAS
HATPase_c
HisKA
PAS_3
PAS_8
Response_reg
Motif
Other DBs
NCBI-GeneID:
17042816
NCBI-ProteinID:
XP_005649359
JGI:
46955
UniProt:
I0Z2E6
LinkDB
All DBs
AA seq
1327 aa
AA seq
DB search
MTMHACFKLPQLLTTCSRFWVPCSNLLRLSLQSMEVRDSCSYDRGEVLGRPVKGLLLGEG
TEPGARAVLDDAAAQGVERTVEVRVTPMSEAGRITNVIWVHRDVTEVAEQQHMLALRSRV
LNFMSDGIFIADCAGRLMHTNQGFARLTGYEQIEAVGRPWTFLLADDADTALAGSVWAAF
AAGAAVSVDLLLRTKGDTRLWGQISFTPVLSEIDGTVENHVGVITDITARKSTAEAMHLC
DKALAATSEATLITDAAQPDNPIIYVNSGFIKLLGYTMGEVVGRNARFMQGPDSDPEAVA
ELRDAVRTGRATVVELINLRKDGSRFWNQARPLLRFCPGFVSMTPIKDSSGFVTNFVGVL
QDVTERKASEAAFKLRDHALSNLNEGITIADPNLPDCPLMYVNEAFCRMTGYAREEIIGR
NCRFLQGPDTDPASVVRIREALEQKREVSLEILNYKKNGDKFWNLLSMMPVCNAAGAVVS
FIGVQSDITELIRRKHAERELQQAKVAAETATEAKSMFLANMSHEIRTPLNGMIAVAQLL
LSTNLTPEQRELAETILDSGDTLLTILGDILDFSKIDHNSMVLESAPVSLRDVISSTVEM
VAADATKKGLDLAYTMDDALLRRTVLGDAIRIRQVLANILANAVKFTQRGEVVVTATCAD
ASAALPSAAAGRGGDGPGDVCAGRQLVHVAIRDTGIGISEDSMKKLFQCFRQGSESMSRK
YGGTGLGLVISKRLTELMGGTTWVESTVGKGSIFHFTMLLVWADEAPPESPRPLGPLPQI
EHPSPATKGISWQLPVATSAANGWRQLDDNAQWTGPSMAECAQLSGRRAVVDILHQPTAL
QARRGQVAQSCRMLCMEADIGCAVGCSDKYDFAIVGVDEAVAGLRGGWKGRPVVVLGQKE
GVPMGLHPLVSMVARPVKHVRLVTALLKAIALMRSKAQHVPLHGTASARAAAAAIDAFHI
GGGEEPSRRRGRDQTLAQQQRSATARRRMSLDNSALDFGQSDGTAKARQGRRNNPSRTSF
AYDTIEEEEQRAQGSCSSSPPANKFNGAQQRLRTRMEVDEKNSMSSNSSMQSCHTTVSAH
SNNSNSNSNSSNSSSINAADKDQPVAPAAPAAPAAQAERSNSAQPPSESCKRSHGGSQDR
TRASRDNAERGWSSGPPRLTGGGSGAAAAATERSPSPGGALRVLVAEDNLVNQKVLLKVL
QRVTPESKVFVANNGQEALQEMEKNVYDIVLMDVHMPIIDGLEASRRIRDIYPEEDRPKI
VALSADTTQACTLSQPIFESGEIAYMKDMQSQGKDVGIHQFICKPFRIEELQRVLNSTSR
VKRVLPS
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcatgcgtgcttcaagttgccccagctcctgaccacctgcagcagattttgg
gtcccctgctccaacctcttgcggctgtctttgcagagtatggaggtcagggactcgtgc
agctacgaccgaggagaggtgttggggaggcctgtcaagggcctcttgctcggcgagggg
acagaaccaggggcaagggcagtcttggacgatgcggctgcccagggggtggaacgcaca
gtcgaggtgcgggtgacgccaatgagcgaggccggccgcataacgaacgtgatctgggtg
caccgggacgtgaccgaggtggcggagcagcagcacatgctggcgctgcgcagccgcgtg
ctcaacttcatgtccgacggcatctttattgccgactgcgccgggcgcctcatgcacacc
aaccagggcttcgcgcgcctcaccggctacgagcagatcgaggccgtcggccgcccctgg
accttcctgctggccgatgacgcggatacagcgttggcggggagtgtgtgggcggccttc
gcggcgggggccgctgtcagcgtggacttgctgctgcgcaccaagggggacacgcggctg
tgggggcagatcagcttcacgcctgtgctctcagagattgacggcaccgtggaaaaccat
gtgggtgtaattacggacattacggcgcgcaagtctacggcggaggcaatgcacctgtgc
gacaaggcactggcggccacgtcggaggcgacgctcatcacggatgccgcccagcccgac
aatcccatcatttacgtcaactccggcttcatcaagctgctcgggtacacgatgggggag
gtggtggggcgcaatgctcggttcatgcaggggccggactcggacccggaggcggtggcg
gagctgcgggacgcggtgcgcaccggccgcgccaccgtcgtcgagctcatcaacctgcgc
aaggacggctcccgcttctggaaccaggcgcgccccctgctgcgattctgtcctggtttt
gtgtccatgacgcccatcaaggacagctcggggtttgtgaccaatttcgtgggcgtgctg
caagacgtgacggagcgcaaggcctcggaggccgccttcaagctgcgtgaccacgccctc
tccaatctcaacgagggcatcacgatcgcggacccgaacttgccggactgcccgctcatg
tatgtgaacgaggcgttctgccgcatgacggggtatgcgcgcgaagagatcattggccgc
aactgccgctttctgcaggggcctgacaccgacccggcatctgtcgtgcgcatccgcgag
gccctggaacagaagcgggaggtgagcctggagattctgaactacaagaagaacggcgac
aagttctggaacctgctgagcatgatgccggtgtgcaacgctgcgggcgcggtggtctcc
ttcatcggcgtgcagtcagacatcaccgagctcatccgccgcaagcacgccgaacgcgag
ctgcagcaggccaaggtggcggcggagacggcgacggaggcgaagagcatgtttctggcc
aacatgagccacgagatccgcacgcccctcaacggcatgatcgccgtcgcgcagctgctc
ctctccaccaacctcacccccgagcagcgggagctggcggagacgatcctggacagcggg
gacacgctgctgaccatcctgggcgacatcctggacttctccaagatcgaccacaactcc
atggtccttgaatccgccccggtgtcgctgagggacgtgataagttcgacggtggagatg
gtggcggctgacgcgacgaagaaggggctggacctggcttacacgatggacgacgccctc
ctgcgccgcaccgtcctcggagacgccatccgcatccgccaggtgctggcaaacattctg
gcgaacgcggtcaagttcacacagaggggcgaagtggtggtcacggcgacgtgcgcggac
gcatcggcggcgctgccgagcgcggcggccggccgcggtggcgacggccccggggacgtg
tgcgcggggcggcagctggtgcacgtggccatccgcgacacgggcatcggcatcagcgag
gactccatgaagaagctcttccagtgctttcgccagggcagcgagtcgatgagccgcaag
tacggcggcacagggctgggcctggtgatatccaagcggctgactgagctgatggggggc
accacatgggtggagtcgactgtgggcaagggttccatcttccacttcaccatgctgctg
gtgtgggccgacgaggcgccccccgagtccccccggcccttgggtcccctcccccagatt
gagcacccctcccccgccaccaaaggcatatcgtggcagctgccggtggcgacgtcggcg
gcgaacgggtggcggcagctggacgacaacgcgcagtggacgggccccagcatggccgag
tgcgcgcagctctccggccgccgcgccgtcgtcgacatcctgcaccagcccaccgccctg
caggcgcgccgcgggcaggtggcgcagagctgccggatgctgtgcatggaggcagacatc
gggtgcgcggtgggctgcagtgacaagtacgacttcgccatcgtcggcgtggatgaggcc
gttgcgggtctcaggggtgggtggaaggggcgtccggtggtggtgctggggcagaaggag
ggggtgccgatggggctgcacccgctcgtgtccatggtcgcgcgccccgtcaagcacgtc
cgcctcgtcaccgccctgctcaaggccatagccctcatgcgctccaaggcccagcacgtg
ccgctgcacgggacggcgagcgcgcgggcggcggcggcggcgattgacgcgttccacatc
ggcggcggcgaggagcccagccggcggcgcgggcgcgaccagacgctagcgcagcagcag
cgcagcgcaaccgcgcgccgccgcatgagcctcgacaactccgccctcgacttcggccag
tccgacgggactgccaaggcgcggcagggccgcaggaacaacccgagccgcacaagcttt
gcgtacgacacaatcgaggaagaagagcagcgcgcgcagggcagctgctcctcttcgccc
cccgccaacaaattcaatggtgcgcagcagcggttgcggacgagaatggaggtggacgag
aagaacagcatgagcagcaactccagcatgcagtcctgccacaccaccgtctccgcacac
agcaacaacagcaacagcaatagcaacagcagcaacagcagcagcatcaacgccgccgac
aaagatcagccggttgcgccggccgcaccggccgcaccggccgcacaggccgagcgaagc
aattccgcgcagccaccctcggaatcgtgcaaaagaagccacggcggctcgcaggaccgc
acgcgcgcctcgagggacaacgccgagagaggctggagcagcggcccgccgcggttgacc
ggcggcggcagcggtgcggcggctgcggcgaccgagcggtcgccgtcgccggggggcgct
ctgcgcgtgcttgtggcggaggacaacctggtgaatcagaaggtgctgctcaaggtgctg
cagcgcgtgacgcccgagagcaaagtcttcgtcgccaacaacggccaggaagccctgcag
gaaatggagaagaacgtgtacgacatagtgctgatggacgtgcacatgcccatcatcgac
ggtctggaggcctcgcggcgcatacgggacatatacccggaagaggaccggcccaaaatc
gtggcgctgtccgctgacacaacgcaggcatgcacactctcccagcctatctttgaatca
ggagagattgcgtacatgaaagatatgcagtcgcagggcaaggacgtcggcattcaccaa
ttcatctgcaagccattcaggattgaggagctgcagcgtgtgcttaattcaacgtcccgt
gtgaagcgcgtgctgccttcctga
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