KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_47656
Entry
COCSUDRAFT_47656  CDS       T02914                                 
Name
(RefSeq) TAF4-domain-containing protein
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    COCSUDRAFT_47656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csl03021]
    COCSUDRAFT_47656
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_47656
Transcription machinery [BR:csl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     COCSUDRAFT_47656
   Coactivators
    SAGA/TFTC/STAGA complex
     COCSUDRAFT_47656
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     COCSUDRAFT_47656
SSDB
Motif
Pfam: TAF4
Other DBs
NCBI-GeneID: 17040688
NCBI-ProteinID: XP_005647245
JGI: 47656
UniProt: I0YWD2
LinkDB
AA seq 630 aa
MPQPAAQYSQPQQQQQQQQQQQQQQQRPQMPQPAAQYSQQQQQQQMQQRPHMPQQQPGAQ
YSQQRQPVQPVASAAQQQAAFSATMALQAGKGGVPANFNPEQIRQLQQLYQQQQLQRQAQ
GAVQQPQQQQPQQQQQPGQPPPPKQQTMTDLIAYLQKQLPAHEVAALTAHMQAYKVARSQ
AASTAQQPNRNGQQLQAGQLPRAPSPAPPIRPASTPGAVSQAQSAANLAFLRAQQLVRQQ
PQQQQQQPRPAVSQQQFPYPYTTVQQNPGRDPRAQVGSAPMLQQHLQQQMPAQNGVALQH
VAALAAAAAAQQRAAAAGKRPAEPGATDPAAKRVKKEDDLGNDVLADSGVNLEEEESRMV
AGRERNVASTMPLPQETLCINRDPFTQKAREIAREHGLAGVSAEVCKIISLGLEAHLGDL
LRRAFVLARQRADIGRRLPGMEIVGNVRRQVQQIAKKEQEAAEAKEAAEHEKLKAEAKKK
AADDKTRERMEKLNKAQDEKVQASAANAAAQLAFGSNARWNRWGAKKDPAAKPDAAAPSA
AAAGSTAGPAEASALASAAAAPAASAAAPGAAKADGSAGAAQLGMRAAALMPSAQGERRA
LALKDVIAVLERDPMYAKSTFLYKLYERLG
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgccccagccagcagctcagtactcacaaccgcagcaacagcagcagcagcagcagcag
cagcagcagcagcagcagcggccgcagatgccccagccagcagctcagtactcacagcag
cagcagcagcagcagatgcagcagcggccgcatatgccacagcagcagccgggcgcgcag
tattcacagcagcggcagccggtgcagccggtggcgagtgcggcgcagcagcaggcagca
ttctcagcaaccatggcgctgcaggcggggaagggaggagtgcctgcaaacttcaaccct
gagcagattcgccagctccagcaattataccagcagcagcagctgcagcggcaagcgcag
ggggcagtgcagcagccgcagcagcaacagccgcaacagcagcagcagccgggtcagccg
ccgccgccaaaacagcagactatgaccgacctgatcgcgtatctgcagaagcaacttccc
gcccatgaagtggcagctctgacggcccacatgcaggcctacaaggtggccaggtctcag
gcagcgtccactgcgcagcagccgaaccgtaacgggcagcagctgcaggcagggcagctg
cccagagcgccgtcacctgccccacccatcagaccagcttccacccctggggcagtgtca
caggcgcagtcagcggcaaatctggcgttcctgcgagcgcagcagcttgtcaggcagcag
ccgcaacagcagcagcagcagcctcgaccggctgtatcccagcagcagtttccgtaccca
tacacaacagtgcagcagaacccagggcgggatccgcgcgcgcaggtggggtcagcgcca
atgcttcagcagcatctgcagcagcagatgccggcgcagaatggggtggcattgcagcac
gtggctgcgctggcggcggcggccgctgctcagcagcgggcagccgccgcgggcaagcgg
ccggccgagccgggtgccaccgacccggccgccaagcgcgtgaagaaggaggatgacctt
gggaatgatgttcttgcggacagcggagtgaatctggaggaggaggagagccggatggtg
gcgggccgtgagcgcaacgtagcctccaccatgccgctgccccaggagaccctctgcatc
aaccgcgacccctttacccaaaaggcgagggagatagcgcgggagcacgggttggcgggc
gtatccgcagaggtctgcaaaatcatcagcctgggcctggaggcgcacctgggcgacctg
ctccggcgcgcattcgttctggcccggcagcgcgctgacatcggccgccgcctgcctggc
atggagatcgtgggcaacgtgcggaggcaggtgcagcagatcgcgaagaaggagcaggag
gctgcggaggctaaggaggccgctgagcatgagaagctcaaggcggaagccaagaagaag
gcagcggatgacaagacgcgcgagcggatggagaagctgaacaaggcgcaggacgagaag
gtgcaggcctcggcggccaacgcggccgcgcagctggctttcggctccaacgcgcgctgg
aaccgctggggcgccaaaaaggacccggcggctaagcccgacgccgccgcgccgtcggcc
gccgcggccgggagcactgccgggccagctgaggcgtcggccttggcgtcggctgccgcc
gctcccgcggcctccgctgcggctcctggggccgccaaagcagatggtagcgcaggtgcg
gcgcagctgggcatgcgtgcagcggcgcttatgccctcggcacaaggggagcgcagggcg
ttggcgctgaaggatgtgattgcagtgctggagagggaccccatgtacgccaagagcaca
ttcctctacaagctctacgagcgcttgggctga

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