Coccomyxa subellipsoidea: COCSUDRAFT_47656
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Entry
COCSUDRAFT_47656 CDS
T02914
Name
(RefSeq) TAF4-domain-containing protein
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSUDRAFT_47656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_47656
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_47656
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCSUDRAFT_47656
Coactivators
SAGA/TFTC/STAGA complex
COCSUDRAFT_47656
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
COCSUDRAFT_47656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
Motif
Other DBs
NCBI-GeneID:
17040688
NCBI-ProteinID:
XP_005647245
JGI:
47656
UniProt:
I0YWD2
LinkDB
All DBs
AA seq
630 aa
AA seq
DB search
MPQPAAQYSQPQQQQQQQQQQQQQQQRPQMPQPAAQYSQQQQQQQMQQRPHMPQQQPGAQ
YSQQRQPVQPVASAAQQQAAFSATMALQAGKGGVPANFNPEQIRQLQQLYQQQQLQRQAQ
GAVQQPQQQQPQQQQQPGQPPPPKQQTMTDLIAYLQKQLPAHEVAALTAHMQAYKVARSQ
AASTAQQPNRNGQQLQAGQLPRAPSPAPPIRPASTPGAVSQAQSAANLAFLRAQQLVRQQ
PQQQQQQPRPAVSQQQFPYPYTTVQQNPGRDPRAQVGSAPMLQQHLQQQMPAQNGVALQH
VAALAAAAAAQQRAAAAGKRPAEPGATDPAAKRVKKEDDLGNDVLADSGVNLEEEESRMV
AGRERNVASTMPLPQETLCINRDPFTQKAREIAREHGLAGVSAEVCKIISLGLEAHLGDL
LRRAFVLARQRADIGRRLPGMEIVGNVRRQVQQIAKKEQEAAEAKEAAEHEKLKAEAKKK
AADDKTRERMEKLNKAQDEKVQASAANAAAQLAFGSNARWNRWGAKKDPAAKPDAAAPSA
AAAGSTAGPAEASALASAAAAPAASAAAPGAAKADGSAGAAQLGMRAAALMPSAQGERRA
LALKDVIAVLERDPMYAKSTFLYKLYERLG
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccccagccagcagctcagtactcacaaccgcagcaacagcagcagcagcagcagcag
cagcagcagcagcagcagcggccgcagatgccccagccagcagctcagtactcacagcag
cagcagcagcagcagatgcagcagcggccgcatatgccacagcagcagccgggcgcgcag
tattcacagcagcggcagccggtgcagccggtggcgagtgcggcgcagcagcaggcagca
ttctcagcaaccatggcgctgcaggcggggaagggaggagtgcctgcaaacttcaaccct
gagcagattcgccagctccagcaattataccagcagcagcagctgcagcggcaagcgcag
ggggcagtgcagcagccgcagcagcaacagccgcaacagcagcagcagccgggtcagccg
ccgccgccaaaacagcagactatgaccgacctgatcgcgtatctgcagaagcaacttccc
gcccatgaagtggcagctctgacggcccacatgcaggcctacaaggtggccaggtctcag
gcagcgtccactgcgcagcagccgaaccgtaacgggcagcagctgcaggcagggcagctg
cccagagcgccgtcacctgccccacccatcagaccagcttccacccctggggcagtgtca
caggcgcagtcagcggcaaatctggcgttcctgcgagcgcagcagcttgtcaggcagcag
ccgcaacagcagcagcagcagcctcgaccggctgtatcccagcagcagtttccgtaccca
tacacaacagtgcagcagaacccagggcgggatccgcgcgcgcaggtggggtcagcgcca
atgcttcagcagcatctgcagcagcagatgccggcgcagaatggggtggcattgcagcac
gtggctgcgctggcggcggcggccgctgctcagcagcgggcagccgccgcgggcaagcgg
ccggccgagccgggtgccaccgacccggccgccaagcgcgtgaagaaggaggatgacctt
gggaatgatgttcttgcggacagcggagtgaatctggaggaggaggagagccggatggtg
gcgggccgtgagcgcaacgtagcctccaccatgccgctgccccaggagaccctctgcatc
aaccgcgacccctttacccaaaaggcgagggagatagcgcgggagcacgggttggcgggc
gtatccgcagaggtctgcaaaatcatcagcctgggcctggaggcgcacctgggcgacctg
ctccggcgcgcattcgttctggcccggcagcgcgctgacatcggccgccgcctgcctggc
atggagatcgtgggcaacgtgcggaggcaggtgcagcagatcgcgaagaaggagcaggag
gctgcggaggctaaggaggccgctgagcatgagaagctcaaggcggaagccaagaagaag
gcagcggatgacaagacgcgcgagcggatggagaagctgaacaaggcgcaggacgagaag
gtgcaggcctcggcggccaacgcggccgcgcagctggctttcggctccaacgcgcgctgg
aaccgctggggcgccaaaaaggacccggcggctaagcccgacgccgccgcgccgtcggcc
gccgcggccgggagcactgccgggccagctgaggcgtcggccttggcgtcggctgccgcc
gctcccgcggcctccgctgcggctcctggggccgccaaagcagatggtagcgcaggtgcg
gcgcagctgggcatgcgtgcagcggcgcttatgccctcggcacaaggggagcgcagggcg
ttggcgctgaaggatgtgattgcagtgctggagagggaccccatgtacgccaagagcaca
ttcctctacaagctctacgagcgcttgggctga
DBGET
integrated database retrieval system