Coccomyxa subellipsoidea: COCSUDRAFT_47659
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Entry
COCSUDRAFT_47659 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K24260
WD repeat-containing protein 11
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_47659
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csl03037
]
COCSUDRAFT_47659
Membrane trafficking [BR:
csl04131
]
Endosome - Lysosome transport
Others
Others
COCSUDRAFT_47659
Cilium and associated proteins [BR:
csl03037
]
Other cilia and associated proteins
Other cilium assembly proteins
COCSUDRAFT_47659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
17040696
NCBI-ProteinID:
XP_005647253
JGI:
47659
UniProt:
I0YWE0
LinkDB
All DBs
AA seq
1802 aa
AA seq
DB search
MQLACVLQGPHRSSVVTAVSWCPECHSRDMKEGAGLRLASGDSEGRVVVWDIATATPVIA
LEDPLTAAQVGSKRTEPGKGNAALWRKDFGAEAALASVRVDPGDARRLVLCGQRGSLIVL
KLGNMARDRVEQQQYKVDMSASKPGDTLRAAFSTTRDLLYVLLPREVVVFDLEYGQPAAS
TTLPTSRPAFRDVLGCFGHADVGKGLSESGDGSLSIWRRTEGQLTYSLLGLHKLVPPPSR
VNNNSTLSLLCASAAAWVRCDIDALRGSDSASTTFEPLDSLPPNSLGAATRALMTKGRKL
STIYSRVLGESGEGASWQKHTLGQRGSGLDPHRAAPEAPTSAAAPSGVPQSAGRTESTQQ
SGAQQQGHLSGAGGSSLSAYAQEDRSSEEEADFLRSSISGRSSGESSLGRIFTAQSSLDP
VPETSEAAPVDLEKTFGPLTSYPVRLSPAASSSAGGYGGISPRGSGGLPMQHSLGDPGGA
GGEGTAPLLSSSPARSPMVRRQSSLKPPRPPGSALKSAKSLTFSTAPPGDCAASSSDDGA
PRAPPSVSSTTSNSPISSLSAPRNSFEERITSGGFASPSGADHSTFRAAAASPPQSVFEQ
HAPAPSAAPLQQNPVSPFDRGSAAAPQMRPSLAAAVEANGAAIGASLYSAAIPTTDVPSP
HESLLLMAVSEEGYVWQWDVPLQDLFEDDVAAPGFPSAPTMLPTAFSIAVPSKTANAAAP
AATGSTKPRLLGLLQTLPHSVTTFSVCPVAVGVGMLGMPGGPPSASSGRGGDAVAVLAAV
TAAGNVEFVTLQRGAVSPLMGTVSVSLGAHKDVVRGVRWLGPSARVVSFSSEKTQHGYRN
TLLITDVRSRASLPFREVGPEAAPMLGIRASPSGRYLLILLRGAPSEIWALGGNTKPTRI
RVLDLPFTAVEWVLPGDLATWHSAGSDSWMVWERSPLARERSLMGYWDEADDHQIAAAAQ
GATEGPSTGGSGQEGAASAAPNDITGPEERLAFALSDGRVGVLAVKGRKVTDTKPKRPSW
GLMSSSSEGVATAIAAWGHLVIMGDTEGSLNRWDTQTGRISTVQTTQGPVRRIHFAPPAA
EELTRGSSSMSSMGNARVSVLFANGTFGIWELDARNDLKPGPVSVAASARLGKVIDLAWV
PLPAPIGGGSVIVVAGEDGSLACVDATQTVEQRPPKRRLAAFKNLVGGRWPFPQGGLSPP
SALGSSLLLPRPWAALLRLLLQQKVPARTLRKLAGPVVPGDEALLEDVIWACLPKIAKDI
WLQSPHRMYSAEAEELSLLAGGGDMCRSGSEEIGVAQFASTMSVPQDAAWSARFNTFPMA
SSLPTPSPLLVRSAKEPSTQNNEMSISKRAASLKDRIRAGALAKTVGWGGKADEPLPPAP
SAEQSEQRPLAPQKQYAANIGSVVRALTRSRANGQLLHETEWQAYEEAIASGSTAARMAV
VAAVAGSSEEARFWRCLPATLAALKGSLPPALKARLNTMPPQPSALENGILSAFANSTSP
SAASIDDSPFAAKLGIAEEPPDLSQPVLWSPAKELAEARERMTWHELMSRRNIESSEVLQ
ERRVIEYVSVGDFQTAVGFLLASTPEKSIRYYRDALCTLALAAASSQPHVAVAAGNHEMV
SRTLHIQAAKVVAAHAASIGDALLGVPLLCSAGLPQEGVAALQEAGLWRYAATLTAHTLK
GDERSAALDRWAAHVHQSEGDIWRALGIMAAGGALRNAALLLRELRMPDAAAAFCAACKE
AGFHSPFAPTDAGGLENLFHHSGNTPPRRSSSCSGEFMNGQPEANTVEADYLDYCCSVLQ
HL
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggcgtgtgtgctgcaaggtccccacaggagttcagtggtcaccgcagtgagc
tggtgccctgaatgccactccagggacatgaaggagggagcgggcctcaggttggcgtcc
ggggacagcgaggggcgggtggtggtgtgggacatagccacggcgacgccggtgatagcg
ctggaggatccgctgacggctgcccaggtgggcagcaagcggacagagccgggcaagggc
aatgcggcgctgtggaggaaggacttcggcgcagaggccgcgctggcgagtgtgagggta
gaccctggggacgcgcggcggctggtgctgtgcgggcagcgggggtcgctgatcgtgctg
aagctgggcaacatggcgcgtgaccgcgtcgagcagcagcagtacaaggtggacatgagc
gcgagcaagccgggggacaccctgcgcgccgccttctccaccacccgcgacctcctctat
gtcctgctgccgcgtgaggtggtggtgtttgatctggagtatgggcagcctgcggcgtcc
acgacactgcccacatcgcggccggcgttccgggatgtgctgggctgcttcggccacgcg
gacgtcggcaagggcctgtctgagagcggcgatggcagcctgtcgatctggcggaggacg
gaggggcagctgacctactcgctgctgggcctgcacaagctggtgccgccgccctcgcga
gtcaacaacaactcgacgctgtcgctgctctgcgcgtccgcggccgcctgggttcgctgc
gacatcgacgcgctccgaggcagcgactcggcctcgaccaccttcgagccgctggactcg
ctgccgccaaattcactcggcgccgccacgcgcgcgctgatgaccaagggccgcaagctg
tccaccatttacagccgcgtgctgggggaatccggtgagggtgccagctggcagaagcac
accctggggcagcgcggcagtggcctggatccgcacagggccgcacccgaggcgcccact
tcagcggcagcgcctagcggagtgccccagagtgccggccgcaccgagagcacccagcag
tccggcgcgcagcagcagggacatctgagcggcgctggcggcagcagcctgtcagcatac
gcgcaagaagaccgctcatctgaagaggaggcggactttctgcgctcgagcatctccggg
cgcagctctggggagagcagcctcggccgaatcttcaccgcgcagtccagcctggacccc
gtgcctgaaacctccgaggccgcgccggtggatctggaaaagacattcgggccgctgact
agctacccggtgcgcctgtctcccgcggcgtcctccagcgccggcggctacggggggatt
tccccgcgcggctcggggggcctgccaatgcagcactcgctgggggatccggggggcgct
gggggggaggggaccgccccgctgctgtccagctcaccggcgcggtcgcccatggtgcgg
cggcagagctcgctcaagccgccgcggccgcccgggtccgcgctcaaatcggccaaatcg
ctcacgttctcgacggcgccgccgggcgactgcgcggcgtcctcgtccgacgatggcgcc
ccgcgcgcgccccccagcgtatcctccaccaccagtaacagcccgatctcctccctctcg
gcaccgcgtaactccttcgaggagcgcatcaccagcggcggcttcgcctcgccgtccggc
gcggaccattccaccttccgagcggccgccgcctcgccgccgcaatcggtcttcgagcag
cacgcgccggcgccctcggcggcccccctacagcagaacccagtgtcgccctttgacagg
gggtcggcggccgcgccgcagatgcggccgagcctggccgccgccgtggaagccaacggc
gccgcgatcggcgcgtcgctgtactcggcggcgataccgacgacggatgtcccctcgccg
cacgagtcgctgctgcttatggctgtgagcgaggaggggtacgtgtggcagtgggacgtg
ccgctgcaggacctgttcgaggacgatgtggcagcgccgggcttcccgagcgcgccgacg
atgctgccgaccgcgttctccatcgccgttccctccaagacggccaacgccgccgcgccg
gccgccaccggctccaccaagccgcgcctgctcggcctgctccagacgctgccgcacagc
gtgacgactttttcggtgtgccctgtggcggtcggggtgggcatgcttggcatgccgggg
ggcccgccgagtgcttcgtccggccgcggcggcgacgctgtggccgtcctggcggccgtc
accgcggcaggcaatgtggagtttgtcacgctgcagcgcggcgccgtcagcccgctcatg
ggcacagtctccgtctcgctcggcgcgcacaaggacgtggtgcggggcgtgcggtggctg
ggcccgtcggcgcgcgtggtgtcgttcagcagcgagaagacgcagcacggctaccgcaac
acgctgctcatcaccgacgtgcgcagccgtgccagcctgccctttcgcgaggtgggccct
gaggccgcgcccatgctgggcatccgcgcatctccctctggccgctacctcctcatcctc
ctccgcggcgccccctccgaaatctgggcgctgggcggcaacacaaagccgacgcgcatc
cgcgtgctggacctgcccttcacggcggtggagtgggtgctgccgggggacctggccacc
tggcactcggcaggctccgactcctggatggtctgggagcgctccccactcgcgcgcgaa
cgctccctcatgggctactgggacgaagccgacgaccaccaaatcgccgctgccgcccag
ggcgccacagaggggccctccaccggcggatcggggcaggagggggcggcctcggctgct
ccaaatgacataacgggccctgaagagcggctggcgtttgctctgagcgacggccgcgtc
ggcgtgctggcagtgaagggacgaaaggtcacagatacaaagccgaagcggccgtcgtgg
ggcctcatgtccagctcgtcagagggcgttgccacggccattgcagcctggggccaccta
gtcatcatgggtgacaccgaaggcagcctcaaccgatgggacacccagaccgggagaatc
tccaccgtgcagaccacacagggccctgtgaggaggatacactttgcgccgccggctgca
gaggagctgacgcgcgggtcatccagcatgagcagcatgggcaacgcgcgcgtctccgtg
ctgtttgccaacggcacctttggcatctgggagctagacgctcgcaacgacctcaaaccg
ggcccggtgagtgtggcggcgagcgcgcggctgggcaaggtgatagatctagcgtgggtg
ccgctgccggcgcccatcgggggcggtagcgtgatcgttgtggcgggcgaggacggcagt
ttggcatgcgtggacgccacgcagaccgtggagcagcggccgcccaagcgccgcctcgcc
gccttcaaaaacctcgtcggcggccgctggcccttcccccaggggggcctgagcccgccg
tcggcgctgggatcgagcctgctactgccgcggccgtgggcggcgctgctgcggctgctg
ctgcagcagaaggtgccggcgcgaacgctgcgcaagctggcggggccggtggtgcccggg
gacgaagcgctgttggaggacgtgatctgggcctgcctgcccaagattgccaaggacatc
tggctgcagtccccccaccgcatgtactctgctgaggccgaggaactttcgctgctggcg
ggtgggggcgacatgtgccggtcgggcagcgaggagattggggtggcgcagtttgcgtcc
accatgagcgtgccgcaggacgccgcctggagcgctcgcttcaacaccttccccatggcc
tcctccctgcccaccccctcacccctcctcgtcaggagcgccaaggagccttccacccaa
aacaacgagatgtcaatcagcaaacgggcggcgtccctgaaagaccggatacgggcgggt
gcgctggcaaagacggtgggctggggcggcaaggcggacgagccgctgccgccggcgccg
tcggcggagcagtcggagcagcggccgctggcgccgcagaagcagtatgcggccaacatc
gggagcgtggtgcgcgctctcacgcggtcgcgcgccaacgggcagctgctgcacgagacc
gagtggcaggcctatgaggaagccatcgcctccggcagcacggcggcgcgtatggcggtg
gtggcggcggtggcgggaagctcggaggaggcgcgcttctggcgctgtctgccggccacg
ctcgccgccctcaagggctccctgccgcccgcgctcaaagcgcgcctcaacacaatgccg
ccgcagccgtctgcgctcgagaacggcatcctgtccgccttcgccaatagcacctcgccc
agcgccgcctccatcgatgacagcccctttgcagcaaagctgggcattgcggaggagccg
ccggacctgtcgcagccggtactgtggtcccccgccaaagagctggccgaggcgcgcgag
cgaatgacgtggcacgagctcatgtcgcggcgcaacatcgagagcagtgaggtgctgcag
gaacgccgcgtgatcgagtacgtgtccgtgggggacttccagacggccgtcggcttcctg
ctggcttccacgcccgagaagagcatccgctactaccgcgatgccctctgcaccctcgcg
ctcgcggcggcgagctcgcagccgcacgtggcggtggcggcgggtaaccacgagatggtc
tcgcgcacgctgcacatccaggccgccaaagtggtcgcagcccacgcggcctccatcggg
gacgctctgctgggagtcccgctgctgtgctcggccgggctcccccaagagggcgtcgcc
gcgctgcaggaagccggcctgtggcgatacgctgccacgctgactgcgcatacattaaaa
ggggacgagcgctcggccgcgttggacaggtgggcggcgcacgtgcaccagtcggagggc
gacatatggcgcgcgctggggatcatggcggccggcggggcgctgcgcaacgcagcgctg
ctgctgcgcgagctgcgaatgccggacgcggccgccgccttctgcgccgcgtgcaaggag
gccggcttccactcccccttcgcacccaccgacgccgggggcttggagaacctcttccac
cactcgggcaacacaccgccgcggcgcagctccagctgcagcggcgagttcatgaatggg
cagcccgaggcgaacaccgtggaggccgactacctcgactactgctgcagcgtcctccag
cacctgtga
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integrated database retrieval system
