Coccomyxa subellipsoidea: COCSUDRAFT_47664 Help Entry COCSUDRAFT_47664  CDS       T02914                                  Name (RefSeq) WD40 repeat-like protein   KO K17890   autophagy-related protein 16-1 Organism csl  Coccomyxa subellipsoidea Pathway csl04136   Autophagy - other Brite KEGG Orthology (KO) [BR:csl00001]  09140 Cellular Processes   09141 Transport and catabolism    04136 Autophagy - other     COCSUDRAFT_47664  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csl04131]     COCSUDRAFT_47664    03029 Mitochondrial biogenesis [BR:csl03029]     COCSUDRAFT_47664 Membrane trafficking [BR:csl04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     COCSUDRAFT_47664  Others   Specific organelles associated proteins    Auto phagosome     COCSUDRAFT_47664 Mitochondrial biogenesis [BR:csl03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     COCSUDRAFT_47664 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd ATG16 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_VPS8 Ge1_WD40 NBCH_WD40 ArdA Motif Other DBs NCBI-GeneID:  17040705 NCBI-ProteinID:  XP_005647262 JGI:  47664 UniProt:  I0YWE9 LinkDB All DBs AA seq 600 aa AA seqDB search MPFAMEVDISPTIVQNTVLQFQQRNAFTSGFVDVVADYQNLLRRCKESKIRNTQLEKEAL ELRAENATLQQAVEHSAHAAVSNEKVAVAESRAKELQEELTGVYKEKSRLAEELVAASRQ LQIVRDSNEAQARELIDLAAKGRDMRARIKELSDALEKEQAATSLATAELQSRLEEKEAA EKRAAKLENEQAELSKRLVDLKMSEIERMNEVNRMCEEMMTNARNMERAAAASSASSSQV GRFHSLPAGSLTGMVNGIMAKTKGVMHGAIESLVPDAPLRSVPAHEGGCYTLAFDRSGQR MASGGADKVVRLWDACSGHQTGTLLGMTESVTEVAFTCDQKHLLASGADKAVRMWDLASG RVRHTLTGHSQKVSSVDCSPLEPNRAVTAGTDRCIKVWDLGRGYCTSTLICHSSVNSVRL TMDGFAVVSGHFDGALRFWDLRSGKLANEVAGLHTQQITSVSIGLRTGSVLTCGKDNVVK VTDARSFQVQPSMAAPGFAVGGVWSKACLGPDERHCAAGSSTGSVFVWGTEKGNLVKTLR EQGSAQIVQAACWSPQGTPLVSANKEGLITFWQPTPEDSSHHDHSHQRGHHHLHGSRHTH NT seq 1803 nt NT seq  +upstreamnt  +downstreamnt atgccatttgccatggaggttgacatcagtccaaccatagtgcaaaacacagtactccaa tttcagcagcggaatgccttcacctctggcttcgtggatgtcgttgcagactatcaaaat cttctaaggagatgcaaagaatcaaagatccgcaacacgcaacttgaaaaggaggctctt gagctgcgtgccgagaacgcgaccctgcaacaagctgtggagcattctgcgcatgccgca gtgagcaacgagaaggtggcggttgcagaaagcagggccaaagagctgcaggaggagctg acgggggtgtacaaggagaagtcgcggctggcagaggagctggtggcagcttcgcggcag ctgcagatcgtgcgggacagcaatgaggcgcaggcccgagagctaattgatctggcggcg aagggccgagacatgcgcgcccgcatcaaggagctatccgacgcccttgagaaggagcag gctgccaccagcctggccacagctgaactgcagtcgcgcctggaggagaaggaggcggca gagaagagggcagcaaagcttgagaacgagcaggctgagctctccaagcggctggtcgac ctgaaaatgagcgagattgaacgcatgaatgaggtgaataggatgtgcgaggaaatgatg accaatgcgcgcaacatggagcgagccgcggcggctagctccgcttcctcgtcccaagtc ggccgcttccactctcttcccgccggcagcctcacgggcatggtgaatggcatcatggca aagacgaagggcgtcatgcacggggccatcgagtcactcgtccccgacgctcctctgcgc tcggtgcctgcacatgagggcggctgctacacgctcgcctttgacaggtcggggcagcgc atggcgagtgggggagcagacaaagtggtgcggctgtgggacgcatgcagcgggcaccag acgggcacgctgctgggcatgacagaatcagtcacagaggtggccttcacctgcgaccag aagcacctgctggcttccggcgctgacaaggccgtgcgcatgtgggacctcgcgtccggc cgcgttcgccacaccctcactggccacagccagaaggtgtccagcgtggactgcagcccg ctggagcccaatcgggccgtcactgccggcacggaccgctgcatcaaggtgtgggacttg ggaagggggtactgcacgagcacgttgatctgccactccagcgtgaacagcgtgaggctg accatggacggcttcgcggtggtgtccggccactttgacggcgcgctgcgcttctgggat ctgcgctcgggcaagcttgccaacgaggtggccggcctgcacacgcagcagatcacctct gtctccatcggcctccgcaccggctcggtgctgacgtgcggtaaggacaacgtggtgaag gtgacggacgcgcgcagcttccaggtgcagccgtccatggccgcgccgggctttgccgtg ggcggcgtatggagcaaggcctgcctgggccccgacgagcgccactgcgccgcaggatcc tccaccggctcagtctttgtctgggggacggagaaggggaacctggtgaagacgctgagg gagcagggcagcgcgcagatcgtgcaggcggcatgctggagcccccagggaacgcccctg gtctccgccaacaaagaaggcctcatcaccttctggcagcccacccccgaggactccagc caccacgatcacagccatcaaaggggccaccatcaccttcatggcagccgccacacccac tga

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