KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_47678
Entry
COCSUDRAFT_47678  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K11292  transcription elongation factor SPT6
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csl03021]
    COCSUDRAFT_47678
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_47678
Transcription machinery [BR:csl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     COCSUDRAFT_47678
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     COCSUDRAFT_47678
SSDB
Motif
Pfam: SH2_2 HHH_7 YqgF Tex_central_region Spt6_S1 HTH_44 HHH_3 SH2 HHH_9 Tex_N
Other DBs
NCBI-GeneID: 17040735
NCBI-ProteinID: XP_005647292
JGI: 47678
UniProt: I0YWH9
LinkDB
AA seq 1641 aa
MNGRSDLEDSDEEDVVRKTLQQLEEAHASDDGLGEEDAVDEDLNEEEGANNGGEEEEQEK
NGEDLQDSSDEEEEGQDEYDMDDKFLVGDEDEEDEEGEEEGTEEERKRRRRKRRKEAELD
EEDYELIGLRPPRPTEQRKRIRKLADTGQGTTAERLKEDLFGPEDEGLEDEDDDDVAAPA
PRQEQRQDRDFDDGLEEEDEFADFLDYDDEGGVPGEGRRRRRERAQGLPPGISSAAFHEA
QEIFGDVSDLLEEYGNRRRQVVEDDDREDDAILEGDYDDEEAEERQRELEERRQARAMRK
VTEAVEPELMARAMLRPEDDVIRATDLPEREQLRPPIPLDNPDHRACAEWIHEHLVGARS
SEKQFETEILCLGRREVDGPPPDGRLEWNDAEIKEGLTDLSRGERAVRERRSVRAFKAWL
TDDQAQEKLKQNITNVLADMFDSHFEVPYIAQYRKQVADELLAMRKGDVPNVTSKDESRR
RQEKRQPEMPVGVVQAKHRRIRRWDVLWYVHSMAMRWRALARRKEIRERAYQDALERAPE
NAQLTIDRLLDTLRKAESPEEVADVEAKYKLKAAELAEGIADLNIDDQAPLTRRPKKISA
YETLRKAGLEPVVREMVISAQELGENLESQYKKHDCIDPRMMPEEFAAEHVVPGSAFDSP
EALLHGARQMAVSEVVAEPEVRRFVRNKFMPAAVISTEPTPQGETIIDAFHQYGRVKRLR
NKPVNMFEGEEDFLCIVQAEKESLLTVSIEVPEEELEGDLIKSLAEFYVSPGTSISANAW
NEQRMAILHEAVQQRLLPAFALELRGRLLADARHAALHHVRTVEDDEVVERRRFMAVCWG
PGDPATTLAMLDDAGQLSDILFAGQLSGPIRHSRDGLFIDQSKVKDAERIRDFILEHRPH
VVLVGATNLHCKQLHGDLRAIMDHILEHHPQFITRSDVGDVDIVYADETLAALWQTSAAA
QQDMGDQPPLVRRAVALARCALDPLAVLASLCGPSAEILGANLHPLQELLPKQDLLAVAE
RICITATNQVGVDINRVAHNAWQAAPMQFVAGLGPRKAQALLRTVQREQHVTTRLDMWKE
FGVLGKNVFRNCAGSIRVAASGQDMGTADMVPLDDTRVHPSFYDTTACLAQLALGSDRPD
PRNGDTHAVDRVLSKPQLIESLNLMDVLERFKDDASLGKPLSTLRDICFELVQPNGELRV
EADRMGDDQAFWLLTGESPETLKPGRLVTATVMSSGRDDARVRLTDFGGVEGIVRRGDVS
SNGEDISPADRMQRGQTITARIKLVTPTQFVVELTTASNDLMNDSAWEKEYCAKNDNYYY
VLSEAEKAQRAVAEAKAQRSRQIVSRPIRHPYFKNVNAPQATELLKDAAVGSYLLRPSSR
GITQITLTIKVHGSEPDGQGTPVYMHHEVREGKKEEGVGAHLRLGRPLSITLTGGRIEEY
EDLDEILARFADPLVANLKQVMRHRKYREGYWEGHEGLKEQLMAEKAQTKGGAVYLLGCK
LDTPGTFYLGYIINTNPHREYFTVTPDGFYFRHEVRSKVDSVIGLFKQQPVVNRDSAPAA
PAAQPRATQSRSAQPPLPPPPPPPAYPGAQYGGSQGSDWSAVMQQQQQQQPQQAYGQQQW
PAASGYPMQPQQQPGYSAYSR
NT seq 4926 nt   +upstreamnt  +downstreamnt
atgaacggcaggtcagacctagaagattcagacgaggaggatgttgtgaggaaaacactc
cagcaactggaggaagcccatgcaagcgacgacggtctgggcgaagaagatgccgttgac
gaggatctcaatgaggaagaaggtgccaataatggcggagaggaggaggaacaagagaaa
aatggagaggaccttcaggactcgtcagatgaagaggaggagggccaggacgaatatgac
atggacgacaagttcctggtaggcgacgaggatgaagaagatgaggaaggagaggaggag
ggcaccgaggaagagaggaagcggaggaggcgcaagagaagaaaggaggctgagctagac
gaagaggactatgaactcattggcctgcgtccgccgcggcctacagagcagcgcaagcgc
atcaggaagctggcagacacaggccaggggactactgccgagcggctgaaggaagacctt
tttggtcctgaggatgaaggtcttgaggacgaggatgatgatgatgtggcagcgccggcg
ccgaggcaggagcagcggcaggacagggattttgatgacggcctggaggaggaggatgaa
tttgcagacttcctggattacgatgacgaggggggtgtgcccggcgagggccgccggcgc
cggcgggagcgcgcgcagggtctgcccccgggcatctcctcagccgctttccatgaggcg
caggagatctttggggacgtgagtgatttgttggaggagtatggcaatcgcaggcggcag
gtggtggaggatgatgacagggaggatgatgctattttggaaggagactatgatgatgag
gaggcagaggagcgccagagggagctggaggagaggcggcaggcgcgggcgatgcgcaag
gtgacggaggcggtggagccggagttgatggcgcgcgcgatgctgcggccggaggatgac
gtcatccgcgccaccgacctgcccgagcgcgagcagctgcggccgcccatccccctcgac
aaccccgaccaccgcgcctgcgccgagtggatccatgagcacctggtgggggcgcgcagc
agcgagaagcagttcgagacggagattttgtgcctgggaaggcgggaggtggatgggccg
ccgcctgatgggcgcctggagtggaacgatgctgaaatcaaggaaggtctcactgacctg
tccagaggagagagggcggtccgggagcggaggagtgtgcgagcattcaaggcatggcta
acggatgaccaggcccaggagaagctgaagcagaacatcaccaatgttctggccgacatg
tttgacagccacttcgaagtcccttacatcgcccagtacaggaaacaggtggcggatgag
ctgctggccatgcggaaaggggatgttccaaatgtgacgagcaaagatgagtcgcgcagg
cggcaggagaagcggcagccggaaatgccggtcggcgtcgtgcaggcgaagcacaggagg
atccggcggtgggacgtgctgtggtacgtgcacagcatggcgatgaggtggcgagctctg
gcgcggcgcaaggagatccgtgagagggcttaccaggacgcccttgaacgcgcgccagag
aacgctcagctcaccatcgaccgcctgctcgacaccctccgcaaggccgagagccctgag
gaggtggcagatgtggaggccaagtacaagctgaaggccgctgagctggccgagggcatc
gccgacctgaatattgatgaccaggcgcccctcacccgccggcccaaaaagatctcggca
tacgagacactcagaaaggctggtttggagccggtggtgcgggagatggtcatcagcgca
caggagcttggggagaatctggagagccagtacaagaagcatgattgtattgaccccagg
atgatgcccgaggagtttgcggcagagcacgtggtcccgggctctgcctttgactcacca
gaagcgctgctgcacggcgcgcgccagatggccgtcagtgaagtggtggcggagcccgaa
gtgcgcagatttgtccgcaacaagttcatgccagcggctgtcatcagcacagagccgacc
ccgcaaggcgagacgatcatagatgcattccaccaatacggccgtgtgaagcgcctgcgc
aacaagccggtcaacatgttcgagggcgaggaggacttcctctgcattgtgcaggccgag
aaggagagcctgctcacagttagcatagaggtgccagaagaagagctggagggcgatctg
ataaagtccctggcggagttctatgtgtccccggggacgtccatcagcgccaacgcgtgg
aacgagcagcgcatggcaatcctgcacgaggccgtgcagcagcgcctgctgccggcgttt
gcgctggagctgcgcggccggctgctggccgacgcccgccacgccgcgctgcaccacgtg
aggacggtggaggatgatgaagtggtggagcggcggcgtttcatggcggtgtgctggggc
ccgggcgacccggcaaccacgctcgccatgctagacgacgccggccagctcagcgacatc
ctctttgccggccagctcagtggccccatccgccacagccgcgacggcctcttcatagac
cagagcaaggtgaaggatgctgagcgcatcagggacttcatcctggagcaccggccgcac
gtggtgctggtgggagccacgaatctgcactgcaagcagctgcacggcgatctgcgcgcg
atcatggaccacattctggagcaccacccgcagttcatcacgcgctccgatgtcggcgac
gtagacattgtgtacgcggacgagacgctggccgctctgtggcagacctccgccgccgcg
cagcaggacatgggcgaccagccgcccctcgtgcgccgcgcggtggcgctggcgaggtgc
gcgctggaccctctggcggtgctggcgtcgctgtgcggcccctcggccgagatcctgggc
gccaacctgcacccgctgcaggagctgctgcccaagcaggacctgctcgccgtcgccgag
cgcatctgcatcactgccaccaaccaggtgggcgtggacataaacagggtggcccacaac
gcgtggcaggcggcgccgatgcagtttgtggcgggcctggggccgcgcaaggcccaggcg
ctgctgcgcaccgtgcagcgcgagcagcacgtcaccacccgcctcgacatgtggaaggag
tttggcgtgctcggaaaaaacgtcttcaggaattgcgcggggtcgatccgcgtggcggcg
agcgggcaggacatggggacggcggacatggtgcccctggacgacacgcgcgtgcacccc
tccttctacgacaccaccgcctgcctcgcgcagcttgccctcggctctgatcggcccgac
ccccgcaacggtgacacccacgccgtcgaccgcgtgctctccaagccccagctcatcgag
tccctcaacctcatggatgtgctggagcggttcaaggatgatgcctcactgggcaagccg
ctcagcacgctgcgggacatctgcttcgagctggtgcagcccaacggagagctgcgagtg
gaggctgatcgcatgggggacgatcaggccttctggctgctgacgggggagtcgccggag
acgctcaagccggggcggctggtgacggcgacggtgatgtcgtccgggcgcgacgacgcg
cgcgtgcggctgacggatttcggcggcgtcgagggcattgtgcgccgcggcgacgtgtcg
tccaacggcgaggacatctccccggccgaccgcatgcagcgcggccaaaccatcaccgcc
cggataaagctggtgacgcccacacaatttgtggtggagctgacaacggcttccaacgat
ctcatgaacgacagcgcctgggagaaggagtactgcgcaaagaacgacaattactactac
gtcttatcagaggcggagaaggcgcagcgggcggtggcggaagccaaggcgcagcgctcg
cggcaaatcgtgagtcgccccatccggcacccctacttcaagaacgtcaacgcgccgcag
gccaccgagctgctgaaagacgcggccgtgggctcctacctgctgcggccctcctcccgc
ggcatcacccagatcaccctcaccatcaaggtgcacgggagcgagccggacgggcaggga
accccggtgtacatgcaccacgaggtgcgggaggggaagaaggaggagggcgtcggcgcg
cacctgcgcctgggccgcccgctcagcatcacgctgacggggggccgcattgaggagtac
gaggacctggacgagatcctcgctcgcttcgcagatccccttgtcgccaacctcaagcag
gtcatgcgccacaggaagtacagggaggggtactgggaggggcatgagggcttgaaggag
cagctgatggcggagaaggcgcagacaaaggggggcgctgtctacctgctgggctgcaag
ctggacacgcccggcaccttctacctgggctacatcatcaacaccaacccccaccgcgag
tacttcaccgtcacccctgacggcttctacttccgccacgaggtgcggtcaaaggtggac
agtgtgatcggcctgttcaagcagcagccggtggtcaacagggactcagcgcctgctgcg
ccggccgcgcagcctcgcgcaacacagtcgcgctcggcccagccgccgctgccacctccg
cccccaccgccagcctatcctggcgcgcagtatggcgggtcgcagggctcggactggtca
gcagtaatgcagcagcagcagcagcagcagccgcaacaggcgtatggtcagcagcagtgg
cctgcagcttcaggctacccgatgcagccccaacagcagccgggatacagcgcctactca
agatga

DBGET integrated database retrieval system