Coccomyxa subellipsoidea: COCSUDRAFT_48305
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Entry
COCSUDRAFT_48305 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csl02000
]
COCSUDRAFT_48305
Transporters [BR:
csl02000
]
Other transporters
Pores ion channels [TC:
1
]
COCSUDRAFT_48305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
PRRT3
Motif
Other DBs
NCBI-GeneID:
17039159
NCBI-ProteinID:
XP_005645721
JGI:
48305
UniProt:
I0YS08
LinkDB
All DBs
AA seq
634 aa
AA seq
DB search
MSAHHFYQTLDGGCTKHCAPQLVTLRNFRVPLFHSTRKCQQHAAQALQKQGFRKASRRRQ
LSVLSCSGNPAAGAARPAANGDPRKPTTAGKQAPEAAAPSRDSSAVSSNDPPAQSSSQQA
EQQGSLTGLKPFHVAAFAAILACGLAFLAVLLYITADMQFQRACIKVVKRLLKTVALRQV
MGILAAMTFVRFGLEPLVKVLRGIFSAQGSWEKSSEYYILREVYRPLEFLFSVAAFTTLA
ENFLPQLISIPKAMVQNLVRSTLSLTFVIAAARVVFNVKARMTREATWQLELKGDLTKQR
RVEAVDKLLSVLTLLVASVFGLQAIGLDVNSVLAIGGVGGLAVGLAGREILENLFTGLII
LSSSPFEVGDEVLFSPPSGQVVEGIVVDVGWYRTTIRSFEREIFNIPNSVFSRNVVLNIT
RKQREWRFYEFIGLRVDDVGKASAVVADMRKIIRQDPRIIQKLHRRVFFDKLTREQVTIY
VSFYVEAANRDAFMSIKQDLLLAFIDCVDRNGAKLAKQRLEVEVAPSQMAASSQRPASSG
VNDGAASSQKALPEGKAGSQQAPVDVSLTPPGTSSSSGSSAAPETERAGTSSNVVPSTDP
LRSAVAAASGLVVADNMSSDEQPGSMMTASFDVL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcatcacttctatcaaacgttggatggtggttgtacgaaacattgtgctcct
cagttggtcactcttcggaactttagagtgccactatttcacagcacaagaaaatgtcag
caacacgccgctcaggcgcttcaaaaacaggggtttcgcaaagcatctcgcaggcggcag
ctctcagtcttaagctgctcaggaaatccagctgcaggggcagctagaccagctgcaaat
ggcgatcctcgaaagcccacaacagcaggaaagcaggcaccagaggcagctgctccctcc
cgggatagctcagcagtgtcatccaatgacccaccagcgcagagctccagccagcaggca
gagcagcaaggcagtcttacagggctcaaaccttttcatgttgctgcctttgcagccata
ctagcctgtggactcgcgtttttggccgtcctattgtacataacagccgacatgcagttc
cagagagcctgtataaaggtggtcaagcggctgctgaagacggtggccctaaggcaggtc
atgggcatcctagcagctatgacctttgtgcgatttggacttgagcctctggtcaaagtg
ttgagggggatcttctcagctcaagggtcctgggaaaagtcatcagaatactatatcctt
cgcgaggtgtacaggccgctagaatttctgttttccgttgcagctttcacgactctggca
gagaatttcttgccgcagctgatatcaattccaaaagcgatggtccagaatttggtgagg
tccactctgtcgctcacatttgtcatcgcggcagccagggtggtgttcaacgtgaaggca
cgcatgacacgggaggcaacgtggcagctggagctgaagggagatctcaccaagcagcgc
cgggtggaggcagttgacaagctcctgtctgttctgacattgctggtggcatctgtgttc
ggcctgcaagccattgggcttgatgtgaattccgtgctggcgattggtggagttggtggt
ctggcggtgggtctggctgggcgtgagatcctggagaacctgttcactgggctcatcatc
ttgtcgtccagcccttttgaagtgggcgacgaagtgctcttctctcctcccagcgggcag
gtggtggagggtatcgtggtggatgtgggctggtatcgcacgacaatcagaagcttcgag
cgtgagatcttcaatatccccaattccgtcttctcgcgcaatgtggtcctcaacatcacg
cgcaagcagcgggagtggcggttctacgaattcatcggtctgcgagtggatgatgttggc
aaagcttctgcggtggtggcagatatgcgcaagatcattcgccaggatccgcgcatcatt
cagaagcttcaccgccgtgtcttctttgacaagttgacacgggagcaggtgaccatctac
gtctctttctatgtggaggcagccaatcgagatgcgttcatgtccatcaagcaagatctg
ctgcttgccttcatcgactgcgtggacaggaatggcgccaagctcgcaaagcagcggcta
gaggttgaggtggccccatcccagatggctgcctcatcgcagcgtcctgcatcttcgggc
gtgaacgatggcgctgcgtcctcgcagaaggctctgcctgaaggcaaggcaggcagccag
caggcacctgtggatgtatcactgacccctcctggcacgtcatcctcttctggcagcagt
gcagctccagagacagagcgcgccggcaccagcagcaacgttgtacccagcacggatccg
ctgcgttctgctgtagcagctgcgtctggtcttgtggtcgctgacaatatgtcgagtgat
gagcaaccaggctcaatgatgacggcgagttttgatgttttatag
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