Coccomyxa subellipsoidea: COCSUDRAFT_48390
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Entry
COCSUDRAFT_48390 CDS
T02914
Name
(RefSeq) DUF715-domain-containing protein
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_48390
Enzymes [BR:
csl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
COCSUDRAFT_48390
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
COCSUDRAFT_48390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
Methyltransf_32
zf-TRM13_CCCH
MTS
Methyltransf_12
Methyltransf_31
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
17038725
NCBI-ProteinID:
XP_005645290
JGI:
48390
UniProt:
I0YQS7
LinkDB
All DBs
AA seq
544 aa
AA seq
DB search
MTKRCQYYLHEKKRFCSFQSKAGFDKCGNHIEGEGAVKRVPCPIDPHHTVLEKELDWHLP
RCPKALQLQEQQAQPYYSPDCNAGSSDALDHRAASLAADGSRQTHAGNLSSAAGRIAYAR
SLGPEQFSALLARIELAYNQVCGKLGDATEVIPGECTSILETPSGQPLPSTQHVKAFTMK
HGRQQAAILGQMQQAGVLQDPRSTTFVEFGAGKGYLSCMLAESFGAAELVLVDCNSFRMT
ADRTLRRLNAKLQRLRVDIKDFEPAGLPSVAGGQPWVAMGKHLCGAATDFTLRCVARSAR
SGTPGGGPRPPPLGAPSPGAAGSVAAAGQSQNGEGITKEHMSAGSSEGALERFPEAVGRA
DCAGPTAASGVAAVHAATSSSGDGSGVGGLLGCAVATCCHHRCTWEHYVGKPFFSSLGFS
AADFELISWMTGWALCGHGRPRERQAAACSADDEEAASDTDTTDKPNNADSCAAEGDGDI
EQARGFEPSMSLPRERRQVIGAQCKRLIDAGRRHYLRENGFSNANAVQYVDGKVSGENWL
LLAP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaggtgccagtactacctccacgagaagaagcgcttctgcagtttccagtcc
aaagcaggctttgacaagtgcgggaatcacatcgaaggcgagggagcggtgaaacgcgtc
ccttgtcccatagatcctcaccacaccgtgctagagaaagagctggactggcatctgccg
cgttgcccaaaggcactgcagctccaagaacagcaggcccagccatattacagcccagat
tgcaatgcgggcagcagcgatgctctggatcacagggctgcaagcttggcagctgatggc
agcaggcagacgcatgcgggcaatctgagcagtgcagctgggcgcattgcctatgctcgc
agcctgggaccggagcagttttctgccctgctggcgcgcatagagctcgcctataaccag
gtgtgtggcaagcttggagatgccacagaggtcatccctggcgagtgcacctccatcctg
gaaacgccctctggacagccgctgcccagcacgcagcatgtcaaggcgttcacaatgaaa
catggtcgccaacaggccgccatcctcgggcagatgcagcaggccggagttctacaggac
cccaggagcaccacgtttgtggagtttggtgctgggaagggttacctgtcgtgcatgctg
gccgagagctttggagctgccgagcttgtcctggtggattgcaacagcttccgcatgact
gccgaccggacgctgaggaggctgaacgcgaagctgcagcggctgagggtggacataaag
gactttgagccggccgggctgcccagcgtggcaggcgggcagccctgggtggccatgggc
aagcacctctgcggcgcggccaccgacttcacgctgcgctgtgtcgcgcgctcagcccgc
tctggaacccccggtggcggcccccgacccccaccgctgggggccccgtcccccggcgct
gccgggagcgtcgctgccgctggacaatcccagaatggggaggggattacaaaagagcac
atgtcagcgggaagcagcgagggtgctttggagcgctttccagaggcagttggcagagcg
gactgtgctgggccaactgcagcttctggagtggcggcggtacatgcagccacctccagc
tcaggtgatgggtcaggggtggggggcttgctggggtgtgcggtggccacctgctgccac
caccgctgcacatgggagcactatgtgggcaagcccttcttcagcagcctgggcttctcg
gctgctgacttcgagctcatcagctggatgacaggctgggccttgtgtggccatgggcga
ccacgggagaggcaggcagctgcatgcagcgctgatgacgaggaggctgctagtgatact
gacaccactgacaagcccaataatgcagactcctgtgctgcggagggggatggtgatata
gagcaagcacgaggttttgagccgagcatgagcctgccaagggagaggaggcaagtgata
ggtgctcagtgcaagcggctcatagatgcagggcggaggcactacttgcgtgagaacggg
ttttcaaatgccaatgctgtgcagtatgtggatggaaaggtctcaggagagaactggcta
cttctagcaccttga
DBGET
integrated database retrieval system