Coccomyxa subellipsoidea: COCSUDRAFT_48407
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Entry
COCSUDRAFT_48407 CDS
T02914
Name
(RefSeq) RRN3-domain-containing protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_48407
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
COCSUDRAFT_48407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
17038758
NCBI-ProteinID:
XP_005645323
JGI:
48407
UniProt:
I0YQW0
LinkDB
All DBs
AA seq
801 aa
AA seq
DB search
MAAHDTPLLGDADAGDLDELLRLHVKEAVRSKSQKGGVKSASYKNLVDQIRRIKEKALGS
KDEEQVEYLTSVLDALTTCVSSLHEHEHESLLNEVFDISIWQATPDLRAALLRLVTHLVV
ANSALVPLCLRVLAMGLQPPPTPPVQLSPGESSPDSQQWQASPDLVAIQEQVIAALEKVL
MLVPTAPSRLMSVIAGGIPHRLRDRDAQCLYLRGALALAEAPAAAAVREGILAAAAEHLL
SLDVEIRWQDIAAAEADAADEEEGESEQEEEDIFELEGQTEQLHLSPQAQPASAPERLQG
RGGWEGAAGGVETAASPSGRQPTTESAEKLDALMGLVFEHLGRRCEAGQLHAAWATTLHT
FQRTILHTHRSKFTQYLLWYLCEKARPLPLPFLPQPIYPSSTSEDPKHCSVSLVQLLLGQ
LTSPNVAPITRSAAAAYMASFLARAALVPEHILIESLQVLAGWCLAYCQEQDAKDARAAL
TIAPLSTRLDMDAGPLRGIQHQVFYAACQGLLYVLCYRLEQLMDASAPAPSPSPSPSDSN
SGGGRSADIVRQLFTDVMPKLLHHRLAPLAVCLPTVVAEFTRLAQRLELMDCAALLPGRS
EAARAQRPLEMFFPFDPFLLRHSARHLDLGRTYVHWKAGHPRAAPGPADDDASDMSSDEE
VDGVSESSDDDDEASSSSDDDESSSSDGDTSEEDADVPGAQRHRQPLAPAGSAATLWPHA
PIGMRPISAGASRKRPASSTPGSDQGYLHGASFDTNGGMSPLEGSSPGAHPSIAPMSWAQ
SFEGSRLMHRHLQPLVVHTAD
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcatgacacaccattgcttggagacgccgatgcaggagatttggacgagctt
ttgagacttcacgtgaaggaagcggtccgatcgaagtcccagaagggcggcgtcaaatca
gcttcttacaaaaacctagtggaccagatacggcgcatcaaagagaaggcgctgggttca
aaggatgaggagcaagtcgagtatctgaccagtgtcctggacgcactcactacctgcgtg
tccagccttcacgagcatgagcatgagagcctgctgaatgaagtttttgacatctccata
tggcaagccaccccggatctgagagcagcgctgctgaggctggtcacgcatcttgtggtg
gccaacagcgcgctggtgcccctgtgcctgcgagtgctggccatgggcttacagccgcct
cccacgcctcctgtgcagctgtctccaggcgagagctcgcctgacagccagcagtggcag
gcgtcccctgacctggtggcgatccaggagcaggtcattgcagccctggaaaaggtgttg
atgctggtgccgacagcgccgtcgcggctgatgtcggtgatagccgggggcattccccac
cgcctgcgcgaccgcgacgcgcagtgcctctaccttcgcggcgcgctcgcgctggccgag
gcaccggcagccgcagccgtgcgcgagggcatcctggcggcggccgccgagcacctgctg
tccctggacgtcgagatccgctggcaggacatcgccgccgctgaagccgatgcggcggat
gaggaggagggcgagagcgagcaggaggaggaagacatatttgagctggaggggcagacg
gagcagctgcacctcagcccacaagcacagccggcatcggccccagagcggctgcagggg
cgcggcggttgggagggcgctgccgggggcgtggagacagcggcgtcgccgtcggggcgg
cagccgacgacggagtcagcagagaagctggacgcgctgatgggccttgtgtttgagcac
ctgggccgccgctgcgaggcggggcagctgcatgctgcctgggcgaccacgctgcacacc
ttccagcgcaccatcctgcacacccaccgctccaagttcacccagtacctgctctggtac
ctctgcgagaaggcacgccccctccccttgccctttctaccgcagccgatctacccctca
agcacctcggaagatcccaagcactgcagcgtaagcctggtgcagctgctgctggggcag
ctgaccagccccaacgtggcgcccatcacccgctccgcagccgccgcctacatggccagc
ttcctcgcgcgcgccgccctcgtccccgaacacatcctcatcgagtccctccaggtgctg
gcgggttggtgcctggcgtactgccaggagcaggatgcaaaggacgctcgcgcggcgctg
acgattgcaccactgtccacgcggctggacatggatgctgggccactcagaggcatccaa
caccaggtgttctatgcggcctgccagggtctgctgtatgtgctgtgctatcgcctggag
cagctcatggacgcatcagcaccagcaccatccccatccccatccccatcagactcgaac
agtggaggtggcagaagtgcagacatcgtccgacagctcttcacagacgtcatgccaaag
ctactgcaccacaggctggctccgctggcggtgtgcctgccgacagtggtggccgagttc
acgcgcctggcgcagcggctggagctcatggactgcgcggcgctgctcccgggccggagc
gaggcggcgcgcgcgcagaggccgctggagatgttcttcccctttgaccccttcctgctg
cgccactcggcgcgccacctggacctgggcaggacatacgtgcactggaaggccggccac
ccgcgcgccgcgcctgggccggctgacgacgatgcctccgacatgtccagcgacgaggag
gtcgacggcgtcagcgagtcatccgatgatgatgacgaggcgagttccagcagcgacgac
gatgagtcgtcctcatcggacggcgacacctctgaggaggacgcggacgtgcccggggcg
cagcggcaccggcagccgctggcgccggccggatcggccgcaacgctgtggccgcacgcg
cccatcggcatgcggcccatctctgctggcgcctcgcgcaagcgcccggcctccagcact
cccggcagcgaccaggggtacctgcatggagcatccttcgacacaaacggcggaatgtcc
ccactggagggcagctcgcctggagctcacccctccattgcacccatgtcatgggcacag
agctttgagggcagccggctcatgcacaggcacctgcagccgctggtcgtgcacacagca
gactag
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