Coccomyxa subellipsoidea: COCSUDRAFT_48798
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Entry
COCSUDRAFT_48798 CDS
T02914
Name
(RefSeq) TAFII28-domain-containing protein
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSUDRAFT_48798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_48798
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCSUDRAFT_48798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFII28
OrfB_IS605
DMAP1
DUF6197
NAD_binding_6
Motif
Other DBs
NCBI-GeneID:
17037584
NCBI-ProteinID:
XP_005644156
JGI:
48798
UniProt:
I0YMJ3
LinkDB
All DBs
AA seq
198 aa
AA seq
DB search
MEEDDDFNLEDELERELEAGMDVDEEDEEASAATHAVAATSAAVSSGPQPSGEGAADDLT
SAVAAVELGKTQAFDAVQQLEALKQERQRKNQEVLKLLTPEQMDRYEAFRRSKLAKPSMR
KLLHSVTGQAPHMNSTIVMCGIAKLFVGDLVETARMVAAEMGDNGPLRPAHLQEAYQKLD
RQGKIPHSTRKPRRMRML
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatgatgacttcaatctcgaggatgagctggagcgcgagttagaggcggga
atggatgtggacgaagaagacgaggaggcttcagcagcaacgcatgcggtagcagccaca
tctgcagctgtgtcatcaggacctcagccctcaggcgagggagctgcagatgaccttacc
agtgcagttgcagctgttgagcttggcaagactcaagcgtttgatgcagttcagcagctg
gaggcactgaaacaggagaggcaaagaaagaaccaggaggtgctcaagctgctgacacca
gagcagatggatcggtatgaggccttcaggcgatccaagctggccaagccgagtatgaga
aagttgctgcacagcgtgaccgggcaggcgcctcatatgaactcgaccatcgtcatgtgc
ggcatagcaaagctctttgtgggcgatctagtggagacagcgaggatggtggcagcagag
atgggggacaatggaccgctgaggccagcgcacctgcaggaggcctatcagaagttggac
aggcaggggaagatcccccacagcaccaggaagccccgccgcatgcgcatgctgtga
DBGET
integrated database retrieval system
