Coccomyxa subellipsoidea: COCSUDRAFT_48997
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Entry
COCSUDRAFT_48997 CDS
T02914
Name
(RefSeq) hypothetical protein
Organism
csl
Coccomyxa subellipsoidea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
PHD
Agenet
zf-HC5HC2H
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
17036995
NCBI-ProteinID:
XP_005643609
JGI:
48997
UniProt:
I0YKZ6
LinkDB
All DBs
AA seq
1678 aa
AA seq
DB search
MSTIFADDGNEEYCGACRREGVLLCCENCPAAYHFGCAGYGGEEDVPGGEEDAWLCWGCS
QKTKTPFLHSTRPLEKAVGKDVRVASKEGSIEYYRASVVGGNAAAVDVVYEDLPGVRESI
DRSSRRLWHGTLNNDGWERRGSKYVPISRAYAIDINRTSGSPPGKLPGKAEARSTAAAAA
AWQQREPAASGRSHAASKGAQAQDRKKAAPKPVAKKTGSFLTIRNAQASFKHEITVFYLM
QGLGGPRLSAGQQKYPAAPGITGRAEPLPLPSKRPAPAAESAVSKRPRSSAPPTQGIPPV
AAPPPATTAAPPARPPLSQTPLPALLASSQPRTAPAAGAGPPQPPTTAALPARPPLSKAP
PPPTAAPSARPPPLSAPPPPLAVLQLSRAPGAARASPAVSVQSQSVPGTSLPSSASAPDV
QQPLTAVGAGGNAPHQWPTSQAIAQPLAPPPPLPPALLTPDAAAALCSRLGTDQSAEPPG
TAVDMDVNDMRRPFPDPLSLAALADASEWESGIAFGGSPESQGDIVEEMRTEEGSAAEDA
PTPNPAATPEISGAGAFLDDDVGETAFTAALESWLESQKRTMYEPRIQQKPLSAYTLWKL
VAKGGGSKMVTNNKGWARIARAVGAPESMTDKSTVTKRVFQLSLGDFEEATECGETDLGR
PRARAATRTPPPRGRQRNRAGRSSPTRKRQRASGRAAERRVVGWVQVNKELALDVGAAVE
VRSHDKQHTGGWLQARILQVCPGSIYEGGLRFEVELENISGSPGQKSQQAEPPVFGSGAQ
DASEKGSEGGGKGEEAAGRELAWVPLVHAPANTDYPAVLIRQPLQPAAPPTPAVDWRVGE
RVEGYWAEGGSWWPATLEQILPTGDELELRVDPTATNRDGELWVLPADHVRRGHSTEREG
FGLLEPLQEEQWTTVGDLRRKLAWQQHTVDGWSIEAYATQAGMPQTSSEAAGAPPSRLHT
TNRKRPAPDPLASLEEAAARVLGRTLSAATPRAESAAAGLLDLAPFGQRGGPFSSSRPGS
PSVGSVSQIGGGSGGDEAFPDTASGDDNETGRAARRARADQRTMSRMALPPVVAAEELSC
DEALDEGAGPGDGAHAKPGAAAEQFPGRWGKPRKLGGRGKPSGPPLPWECPVVCVPGSLD
NFLTQVRPAAVRDPDYLAKREASAPPGGFHTHNAKRPGKMLPAAATAKPPAAGKPPAAAK
PLAVLNPPAKGKPPAAGVNAPAKGTPPAKGAQRGSAPAKHDEAPAAAPAPAAAAAPESGK
GQGSSRTPPSKQAAGTGQDSRPASAGPTGKEVAIRAPLQVAAGLAVMGRPIGLAKSLPGT
ALSGLLPAEQDNVILAHLKRCGAGQPAAAPVTTHALPYVLLPLPADTRATRRQPPPRPLP
PQPQAAAARSQQAQRAGRYSGAPAASGALSRPPARVLGQFVSEPPSSTPGMYSQPALAMR
SLLTSASEMLARGSAPDRPPPGLVSMPLGLLPPATAPLPNTFSSGDIQRAAEALAAYITP
AGVTPLPSQPLRMHQPRAPYAAGLPGLRPSASGQQQQTTRPAAEAPSMESRYPRIMPLGP
PPENARYPKIQFSFALPPPAFPAPSHVQPPHANGAAVARGGENDLQATPQETAGKPGLAG
RLRQPPPGSSRLVAALSQSLGLSSELLPAAAAQLPPPQLMRATIEQSRLDANGSSGGR
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgatattcgcagatgatggcaatgaggagtactgcggagcctgccgcagggag
ggagtactgttgtgctgtgagaactgtcccgcggcatatcactttggctgtgccggttat
ggcggggaggaggatgtgcctggaggagaggaggatgcatggctgtgctggggctgctcc
cagaagaccaagacgccattcctgcacagcacgcggccgctggagaaggcggtagggaag
gatgtgcgcgttgcctcaaaggaggggtccatcgagtactacagggcttctgtagttgga
gggaacgcggccgccgtggacgtggtgtacgaggatctgcccggggtgcgcgagtcgata
gaccgcagcagccgccgcctgtggcatggcacgctgaacaatgatggctgggagaggcgc
ggcagcaagtatgtgccgataagccgggcatatgcaatcgacatcaaccgcacgtcaggc
tcccctccaggcaagctaccgggcaaggccgaagcgcggagcaccgccgcagccgcagca
gcatggcagcagcgggagccagcagcctcaggccgctcgcacgcagcgtcaaagggagca
caagcgcaggacaggaagaaggcagcaccgaagcctgtggccaagaagactggttcgttc
ttgacaattcgcaatgctcaggcaagtttcaagcatgaaatcaccgtcttttacctcatg
cagggcctgggagggccaaggctgtcagcaggccagcagaaatacccggccgcgcccggc
atcaccggccgggccgagccgttgccgctgccaagcaagcggccggctccggctgcggag
tcggccgtgtctaagcggccgcgcagctcagcgccccccacgcaggggatcccaccagtg
gccgccccgccacccgccaccacagcggcgccccccgctcggccgccgctgtcacagacg
ccgctgccggcgctgctcgcatcctcacagccgcgcactgccccggctgctggggccggc
cccccgcaaccgcccaccactgcagcgcttcccgctcggccgccgctgtcaaaggcgcca
ccgccccccaccgcagcgccgtccgctcggccgccaccgttaagtgcgccgccgccaccg
ctggccgttttgcagctgagcagagcgccaggtgcagcacgcgcgtcgccggcggtctcc
gtgcagtcgcagagtgtcccggggacatccctgcccagcagcgcaagcgcgccggacgtg
cagcagccgctaacagctgtgggtgctggagggaacgcgccgcaccagtggcccacctca
caagccatcgcacaaccacttgcaccgccgccgccgctgccgccggctctcttgacgccg
gatgcagcggcggctctgtgctccaggctcggcacagaccagtcggctgagccgccgggc
actgccgtcgatatggatgttaatgacatgcggcggccattcccggacccactgtcgttg
gcagcactggcggatgcgtcagaatgggagagcggcattgctttcggcggcagtcctgag
tcacaaggagacattgtagaagagatgaggacagaagagggcagcgctgcagaggatgcg
cccacccctaacccagctgccaccccggaaatcagcggtgcaggtgcattcctggacgat
gacgtaggggaaacagcgttcacagcggcgctggagtcttggctggagtcgcagaagagg
accatgtacgagccgcgaatccagcagaagcccctctccgcctacaccctctggaagctc
gtcgcaaagggcggcggctccaaaatggtgacaaacaacaagggatgggcgcgcattgct
cgcgcagtgggggcgccggagtcgatgaccgacaagtccactgtgaccaagcgcgtcttc
cagctctccctgggcgactttgaggaggcgacagagtgcggcgagaccgacctcgggcgg
ccgcgggcgcgggctgcgacgcggacgcctccgccgcggggccggcagcgcaaccgcgcc
ggccgctcctccccaacccgcaagcgccagcgcgcctccggccgcgcggccgagcgccgt
gtcgtcggctgggtgcaagtaaacaaggagcttgcgctggacgtgggtgcagcagtggag
gtcaggagccacgacaagcagcacacaggcggctggcttcaagcccggatcttgcaggtg
tgtcctgggagcatatatgaagggggcctgcgcttcgaggtggagctggaaaacatatct
ggttcccccggccagaaatcacagcaagcagagccgccggtgttcggcagcggagcacaa
gacgccagcgagaagggctcggaaggtggcgggaagggagaagaagctgccgggagggag
ctcgcatgggtgcctctagtgcatgcaccggcaaacacagattatcctgccgtcctgatc
aggcaaccgctgcagccggccgccccccccacgccggccgtcgattggcgcgtcggcgag
cgagttgagggctactgggcggagggcggctcgtggtggcccgcaacgctggaacagatc
ctgccaactggcgatgagctggagctgcgcgtggaccctactgcgacaaatcgtgacggc
gagctatgggtgctgccagcagaccacgtgcgcaggggtcactccaccgagcgcgagggc
tttggactgctggagccgctgcaggaagagcagtggaccacagtgggcgatctacgcagg
aagctggcctggcagcagcacacggtggacggctggtccatcgaggcatatgccactcag
gcaggcatgccccagacctccagcgaggctgcaggggcgcctccctcccgtctgcacacc
acaaacaggaagaggcccgcgccagacccgctggcgagtctggaggaggcagcggcgcgc
gtcctggggcgaaccctctcggccgccaccccgcgcgctgagtcagcggcggccgggctg
ctcgatctggctccctttggccaaaggggcggacccttttcctccagccgccccggctcg
ccgtcagtcggcagcgtctcgcagattggtggcggctccggcggcgatgaggccttccct
gacaccgcctccggcgatgacaacgagacggggcgcgccgcccggagagccagggcggac
cagaggacgatgtctcggatggcgttgcctccggtggtggccgccgaggagctgtcctgc
gacgaggctctggatgagggagccggccccggggacggagcgcatgcaaagccgggcgca
gccgccgagcagttccctggcaggtggggcaagccgaggaaattaggagggaggggaaag
ccttcaggcccaccgctgccctgggagtgtccggtggtgtgcgtgcccggcagcttggac
aacttccttacacaggtgaggcctgccgctgtcagggacccagactacctcgccaagcgg
gaggcatcagcgccacccggcggcttccacacccacaatgccaaacgccctgggaagatg
ttacccgctgcagccacggccaaaccccctgccgcgggcaaaccccccgcagccgccaaa
ccccttgcagtgctgaatccccctgcaaagggtaaaccccccgcagcgggggtcaatgcc
cctgcaaaaggaacccccccggccaagggcgcgcagcgcggatcggctccggcaaagcat
gacgaggcgcctgcggctgccccggcacctgcggcagcggctgcaccggagtcagggaag
ggccagggaagcagcaggactccgccgtctaagcaggcagcgggtacgggccaggactca
cggccagcaagcgcggggcccaccggaaaagaagtggcaatccgcgccccgttgcaggtc
gcagccggcctcgccgtgatgggccgcccgatcgggctcgccaagagcctacccggcaca
gcgctctccgggctgctccccgccgagcaggataacgtcatcctggcgcacctcaagcga
tgcggcgccggccagcccgcggccgcaccggtcacgacccatgcgctcccatacgtgctc
ctcccgctgccagcagacacgcgcgccaccaggcggcaacccccaccgcggccgctgcct
ccgcagccgcaggcggcagcggccaggtcgcagcaggcgcagcgcgccggccgctacagc
ggtgcgccggccgcctcaggcgcgctcagccggccgccggcacgcgtcctcggccagttt
gtcagcgagccgccgtcctccacacccgggatgtactcgcagccggcgctcgcgatgagg
tcgctgctgacgtcggcgagcgagatgctcgcgcgcgggagcgcgccggaccgaccgccg
cccggcctcgtcagcatgccgctcggcctgctgccgccggcgacggcccctctgcccaac
accttcagcagcggcgacatccagcgcgctgcagaggccctcgcggcctacatcacgccc
gccggggtcaccccgcttccctcgcagcctctgcgcatgcaccagccgcgcgccccctac
gcagcaggtcttcccggcctccgcccctccgcgagcggccagcagcagcagacgacaagg
ccggcagcggaggcgccaagtatggagtcgcgctacccccggataatgccgctgggcccc
ccgccggagaatgcacgctaccccaagatccagttcagcttcgcgctgccgccaccagcg
ttccctgctccgtcacatgtccagccaccgcatgcgaatggcgcggcggtagccaggggc
ggcgagaacgatttacaggcgacaccgcaggagacggcggggaagccggggctggccggc
cggctgcggcagccgccgccggggtcgtcccggctggtggcggcgctgtcgcagtcgctg
ggcctgagctcggagctgctgccggcagccgccgcgcagctgccgccgccgcagctgatg
cgtgcgacaatcgagcagtcccgactggatgccaatggaagcagtggcggccgctga
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