Coccomyxa subellipsoidea: COCSUDRAFT_52408
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Entry
COCSUDRAFT_52408 CDS
T02914
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04142
Lysosome
csl04144
Endocytosis
csl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
COCSUDRAFT_52408
04142 Lysosome
COCSUDRAFT_52408
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
COCSUDRAFT_52408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_52408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_52408
Membrane trafficking [BR:
csl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
COCSUDRAFT_52408
Exosome [BR:
csl04147
]
Exosomal proteins
Proteins found in most exosomes
COCSUDRAFT_52408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_Vps41
TPR_PEP5_VPS11
TPR_COPA_B
HepT-like_2
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
17044645
NCBI-ProteinID:
XP_005651179
JGI:
52408
UniProt:
I0Z7L6
LinkDB
All DBs
AA seq
1700 aa
AA seq
DB search
MAAAAPITLKEALLLPNLGINQQFISFTNVTMESDKFICIRETGASNSVVIVDLAAPLTP
LKRPITADSALMNPASKVIALKATVAGSTGDSLQIFNLEMKSKMKSFQIAQPVVFWKWIT
PSKLGLVTATTVYHWDMNGPSDPEKVFDRTANLENTQIINYRVDAQEKWCVLIGIAPGAP
ERPQLVKGFMQLFSVDQKRSQALEAHAAAFSTLKAPGSQTPSTVISFAQKTFANGVLTSK
LHVIELGAAPGTAPLKKQAELFFPPEFADDFPVAMQISEKYGLVYVITKLGLLFVYDLQT
ATAVYRNRISPDPIFLTASSASTGGFYAINRRGQVLLATVNEQTMVPFVSQQLNNLELAL
SLAKRGNLPGAEALVGQNFERLFANGQFKEAAEAAAESPQGVLRTKETIDRFKSVAPTPG
QTSPLLVYFGTLLTRGKLNVFESAELAQLVLSQNKKHLLDNWLKEDKLEPSEQLGDLLRR
AGDNDAALAVYQKANVPGKVIEGLAAKGDFEALSKFSAAQGYKPDYLYLLQRLCMDSPEG
AVNLAKTVAKQPGPPIDLNTMADLFLQRNMVREATAFLLDVLQDNLPEHDKLQTKLLEIN
LIQTPQVADAILANGVLTHYDRPRIAQLCEKAGLYMRALQHYTDLTDIKRVIVNTHAIDP
QQLVEFFGSLSAEWALDCLKVLLETNTAGNLQLVVQVAKEYTEQLGAGKIMELLESHKSY
HGLYYYLGGHIAFSEDPEVHYKYIEAAAKTGQLKEVERVTRESAHYPPERVKQFLMEAKL
PDARPLINVCDRFDMVTDLTHYLYSNNMLRYIEGYVQKVNPAKAPQVVGGLLDAEAPDEF
VNNLILSVRSLIPVEQLCAEVEKRNRLKLLNPFLEHLVSEGSTDPAVHNALGKIIVDSNN
NPEHFLTTNPYYDSAVVGKYCEKRDPNLACVAYKRGSCDDALVDCTNRHSLFKVQARYIV
ERMDSDLWTKVLDEENPFRRQLIDQVVSTALPESKNPEQVSVAVKSFMQAGLQAELIELL
EKIVLQNSSFSNNHNLQNLLIITAIKADKSRVKDYIHRLDNFDGPAVGEIAVGYEMFEEA
FEIYKKFGLKTQAIKVLLDHQEDLDRALEYALKVDEAGVWTELGHAQLEAGAINDAIGSY
LRSGDSSRYMDVIARSQEANAHGDLVKYLLMVRKKVKESKVDTELVYAYAKTEDMGALEE
FMSGTHQANLQSVGDRVFDEGMFEAARAIFAHIPNWGRLASTLVRLHQFQQAVDAARKAN
SPKTWKEVCYACVEEGEFRLAQLCGLNIIVNADDLEEVSEFYQRRGYFEELIALLESGIG
LERAHMGIFTELGILYAKYKSEKLMEHLKLFAARLNIPRLIRVCEEQQHWRELVFLYVAY
DEYDNAALVMMAHSPTAWEHVQFKDVAVKVSNAEVYYKAVSFYLEQHPDLLVDLLKVLEA
RVDHVRVVGILRKADHLPLIKEYLLAVQKANLAAVNEAVNELLIEEEDFGGLRDSITTYD
NYDQISLATRLERHDLTEFRRIAAHIYKSNLRWRKAVALAKQDKLYKDAMETAAQSGDAE
IAEELLKFFVEQKERECFAACLFTCYDLIKPDVALEVAWMNGLMDFVFPYLIQFLKEYTG
KVDLLYTERKERQSAAVDEESAKKQQEAQSNAYLQLMPLALPAPPVAGGPGGGGFGGAPA
GFGGAPATFGQPPADFGPQF
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcagcgccaataaccttgaaggaggccttgctgttgcccaatcttgggatc
aaccagcagtttatctctttcaccaatgtcaccatggagagtgataaattcatatgcata
cgggagacgggggcatctaattcagtcgtcatcgtggacctagctgcacctctgacgccg
ttgaaacggcccatcactgcagactcggcgttgatgaacccggcctccaaggtcatcgca
ttgaaggcgaccgtagcaggatcgacgggggacagtctgcagatcttcaatctggagatg
aagtcgaagatgaagagcttccagattgcacagccagtggtcttctggaagtggattaca
ccttcaaagctgggcctggtgactgcaaccaccgtctatcattgggacatgaatggtcct
tcggatcccgagaaagtttttgacaggacggctaaccttgagaacacccagatcatcaac
tacagggtcgacgcacaggagaagtggtgtgtgctgattggcattgcacccggcgctccc
gagaggccacagctggtgaagggcttcatgcagcttttctcagtggaccagaagcgcagc
caggcactggaggcgcatgcagctgcattttcgaccctgaaggcccctggctctcagaca
ccgagcactgtgatcagctttgcccagaagaccttcgcgaatggcgtcctgacgtcaaag
ctgcacgtcatcgagctgggagcagctcctggcactgctccgctgaagaagcaggccgag
ctgttcttcccgccggagtttgcggacgacttccccgtggccatgcagatcagcgagaag
tatgggctggtgtatgtgatcaccaagctgggcctgctgtttgtgtacgacctgcagacg
gccaccgccgtgtacaggaaccgcatctctcctgaccccatcttcctgacggcttcctca
gcctccaccggcggtttctacgccatcaacaggagagggcaggtcctgctggcgaccgtg
aatgagcagaccatggtgccctttgtgagccagcaactgaacaacctggagctggcgctg
tcgctggccaagcgcggcaacctgccgggggcggaggcgctggtggggcagaacttcgag
cggctctttgccaacgggcaattcaaggaggctgctgaagccgctgcagagtcacctcag
ggcgtgctgcgcacaaaggagaccatcgaccgcttcaagtcggtggcgccgacgccgggg
cagacttcgccgctgctggtgtactttggcacgctgctgacgcgcggcaagctgaacgtg
tttgagagcgcggagctggcgcagcttgtgctctcgcagaacaagaagcacctcctggac
aactggctcaaggaggacaagctggagcccagcgagcagttgggtgatctgctgcggagg
gccggcgacaacgatgcagctctggccgtgtaccagaaagcaaacgtgcctggcaaggtc
atcgaggggcttgctgccaagggtgacttcgaggcgttgtcaaagttcagcgctgcgcaa
ggctacaagccggactacctgtacttgctgcagcggctgtgcatggacagcccagagggc
gcggtcaacctggccaagacggtagccaagcagccgggtccgcccatcgatctcaacacc
atggcagatctgttcctgcagcgcaacatggtccgcgaggccaccgccttcctgctggac
gtcctgcaggacaacctgcccgagcatgacaagctgcagacaaagctgctggagatcaat
ctgatccagacgccgcaagtggcggacgcgattctggcgaacggggtgctgacgcactac
gaccgcccgcgcattgcgcagctgtgcgagaaggctggcctgtacatgcgcgcgctgcag
cactacaccgacctcaccgatatcaagcgcgtcatcgtcaacacccacgccatcgacccc
cagcagctcgttgagttcttcggctccctcagcgccgagtgggccctcgactgcctcaag
gtcctgctggagacgaacacggcgggcaatctgcagctggtggtgcaagtggccaaggag
tacacggagcagctgggggctggcaagatcatggagctgctggagagccacaagagctac
cacgggctgtactactacctgggcggccacatcgcgttcagcgaggaccccgaggtgcac
tacaagtacatcgaggccgccgccaagacggggcagctgaaggaggtggagcgcgtcacg
cgcgagtccgcgcactacccgcccgagcgcgtcaagcagttcctcatggaggccaagctg
ccagacgccaggccgctgatcaacgtgtgcgaccgctttgacatggtgacggacctgacg
cactacctgtactccaacaacatgctgcggtacatcgaggggtatgtgcagaaggtcaac
ccggccaaggcgccccaggtggtgggcggcctcctggacgccgaggcccccgacgagttt
gtcaacaacctcatcctctccgttcgctccctcatccccgtggagcagctctgcgcagag
gtggagaagcgcaaccggctgaagctgctgaaccccttcctagagcacctggtgtcggag
ggttccacggacccggcggtgcacaacgcgctgggcaagatcatcgtggacagcaacaac
aaccccgagcacttcttgaccaccaacccctactacgactccgccgtggtcggtaagtac
tgcgagaagcgcgaccccaacctggcctgcgttgcctacaagcgcggctcctgcgacgac
gcgctcgtcgactgcaccaaccgccactccctcttcaaggtgcaggcgcgctacattgtc
gagcgcatggactccgacctctggaccaaggtcctcgatgaggagaacccattccgccgc
cagctcatcgaccaggtggtgtccacggcgctgccggagtccaagaacccggagcaggtg
tccgtggcggtgaagagcttcatgcaggctggcctccaggccgagctgatcgagctgctg
gagaagatcgtgctgcagaactcctccttctccaacaaccacaacctgcagaacctgctc
atcatcaccgccatcaaggctgacaagtcgcgcgtcaaggattacatccaccgcctggac
aactttgacggcccggccgtgggtgagatcgcggtgggctacgaaatgtttgaggaggcg
tttgagatctacaagaagtttgggctcaagacccaggccatcaaggtgctcctggaccac
caggaggacctcgatcgcgccctggaatacgccctcaaggtggacgaggctggtgtctgg
acggagctgggccacgcgcagctggaggcgggcgccatcaacgatgccatcggctcctac
ctgcgcagcggcgacagcagccgctacatggacgtcatcgcgcgcagccaggaggccaac
gcgcacggcgacctcgtcaagtacctgctcatggtccgcaagaaggtcaaggagagcaag
gtggacacagagctggtgtacgcgtacgccaagacggaggacatgggagcgctggaggag
ttcatgtcgggcacgcaccaggccaacctgcagtccgtgggcgaccgcgtcttcgacgag
ggcatgttcgaggcggcgcgggccatctttgctcacatccccaactggggccgcctcgcc
tccacactcgtgcgcctgcaccagttccagcaggctgtggatgccgccaggaaagccaac
tcgcccaagacctggaaggaggtgtgctatgcgtgtgtggaggagggtgagttccggctg
gcgcagctgtgcggcctgaacatcatcgtgaacgcggatgacctggaggaggtgtcagag
ttctaccagcggagaggctactttgaggagctcatcgccctgctggagtccggcatcggc
ctggagcgagcccacatgggcatcttcacagagctgggcatcctgtacgccaagtacaag
tcggagaagctgatggagcacctgaagctgtttgcggcgcgcctcaacatcccgcgcctc
atccgtgtgtgcgaggagcagcagcactggcgcgagctggtcttcctgtacgtggcctac
gacgagtacgacaacgcggcgctggtcatgatggcgcactcgcccaccgcctgggagcat
gtccagttcaaggacgtcgccgtcaaggtgtccaacgcggaggtgtactacaaggccgtc
tccttctacctggagcagcacccggacctcctcgtcgacctcctcaaggtgctggaggcg
cgcgtggaccacgtgcgggtggtgggcatcctgcgcaaggcggaccacctgccgctgatc
aaggagtacctgctggcggtgcagaaggccaacctggcggccgtcaacgaggccgtcaac
gagctgctgattgaggaggaggactttggcggcctgcgcgacagcatcaccacctacgac
aactacgaccagatcagccttgccacgcgcctcgagcgccacgacctcaccgagttccgc
cgcatcgccgcccacatctacaaatccaacctgcgctggcgcaaggccgtcgccctcgcc
aagcaggacaagctctacaaggatgcgatggagacggctgcgcagtccggggatgcggag
attgcggaggagctgctcaagttcttcgtggagcagaaagagagggagtgctttgcggcc
tgcctcttcacctgctacgacctcatcaagccagacgtggctctggaggtggcctggatg
aacgggctcatggactttgtgttcccgtacctgatccagttcctgaaggagtacacgggc
aaggtggacctgctgtacaccgagcgcaaggagcgccagtcggccgcggtggacgaggag
tcggccaagaagcagcaggaggcgcagtccaacgcctacctgcagctcatgcccctcgcg
ctgcctgcgcccccggttgcggggggccccggcggcgggggcttcggcggcgccccggcc
ggcttcggtggcgcgccggccaccttcggccagccgcctgcagacttcggcccgcagttc
tag
DBGET
integrated database retrieval system
