Coccomyxa subellipsoidea: COCSUDRAFT_52414
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Entry
COCSUDRAFT_52414 CDS
T02914
Name
(RefSeq) DNA-directed RNA polymerase III, subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
COCSUDRAFT_52414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_52414
Enzymes [BR:
csl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
COCSUDRAFT_52414
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
COCSUDRAFT_52414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
17045045
NCBI-ProteinID:
XP_005651194
JGI:
52414
UniProt:
I0Z7N1
LinkDB
All DBs
AA seq
1170 aa
AA seq
DB search
MTIASWPGDQSNGTGAYENGVHEALLADPSKLTHPIKEVADKYELLPAFLKVRGLVKQHI
DSFNYFINQEIKKIVHAKGNEKVTCDTDPNFFFKYTDIFVGRPQVEEDYITTGITPQACR
LRDMTYAAPISVDVEYTRGKEIVVRKGKNGVGAVVIGRMPLMLRSDRCVLKGKSEAQLAE
LGECPLDPGGYFVVKGAEKVILIQEQLSKNRIIIDLDSKGQVTASVTSSTHERKSKTNIV
LGRKGQLCLRHNAFTEDVNMVAVLRAMGVESDQEILALVGCEPGLAALLAPTLQEAKAMG
LFIRQQALEYLGSRVKAGKQQYSSRRSRSKVDEARDILANVVVCHIPVPQYDFQQKVIYM
AVMMRRMIAAMLDSTLIDDRDYYGNKRLELAGGLLALLFEDLFKRMNNELKRTADNTLSK
ANRASQFDAAKNLHVEMISQGMESAISSGNWTIRRFRMERKGVTQVLSRLSFIAALGMMT
RITSQFEKTRKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALMTHVTTDEEEAPLAR
LAHLLGTQPATLVSGFEYSSRGVAMVFLNGSILGIHRRPKRLVKEFRRLRRAGRVGEFVS
IFLQQDSVYIASDGGRVCRPLIICDRGVPRVTSAHTAKLKSGEWGFSDFLRNGLVEYLDV
NEENNALIALYERNCGVATTHLEIEPFTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMG
NIAYNQLNVMDTLLYLLVYPQRPLLTTKTIELVGFDKLGAGQNATVAVMSYSGYDIEDAI
IMNRASLDRGFGRCIVLRKYGTVLKKHQNRSQDTVVAAPLPPGQSKPTGRHKLLDEDGLA
APGEIASPGEILINKQVPMSTKDPLPHGMVSLPPSAYKPAPVSWKGPPGESCIVDKVLLT
NNDDGHTVIKTLMRHTRRPEVGDKFSSRHGQKGVVGSIVAQEDMPFSERGICPDLIMNPH
GFPSRMTVGKMLELIGSKAAVQSGRFHYGTAFGESTGLADNVDSISKTLVEHGFSYSGKD
QLTSGSSGEPLEALIFMGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRSRDGGLRL
GEMERDCLIGYGASMLLLERLMISSDQFQVHVCNHCGLLGYFDANVGCAVCPSTKSSDDM
STLKLPYACKLLFQELQSMNIVPRLKLAEA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgcaagttggcctggcgatcagtccaatggcactggcgcctatgagaacggc
gtgcatgaggcactgctggcagacccctccaaattaacacatcctatcaaggaggttgca
gacaagtatgagctgctgccagccttcctcaaggtgcgaggactggtgaagcagcatatc
gactcctttaattacttcatcaaccaggagatcaagaagattgtccacgccaagggcaat
gagaaggtcacctgcgacacagaccccaactttttcttcaagtacacagatatctttgtg
ggccggccgcaagtggaggaggattacatcacgacagggatcacgccgcaggcctgccgt
ctgcgggacatgacatatgcagcgcccatcagcgtggatgtggagtatacccgcggcaaa
gaaatcgtggtccgtaaaggcaagaatggtgtcggcgctgttgtcattggccgcatgccc
ctaatgctccgcagcgaccggtgcgtgctcaagggcaagtcagaagcccagcttgcggaa
ctaggtgaatgcccgctggatcctggcggctactttgttgtgaagggcgctgagaaggtc
atcctgatccaagagcagctctcaaagaataggatcatcatcgatctggacagcaagggc
caagtgacagcctctgtcacctcgtccacccacgagcgcaagtccaagaccaacatcgtg
ctgggcaggaaggggcagctctgcctgcgccacaatgccttcacggaggatgtcaacatg
gtggcggtgttgagggcgatgggggtggagagtgaccaggagattctggcgctggtgggc
tgtgagcccggcctggctgcactgctggctcccacactgcaagaggccaaggccatgggc
ctcttcatccgccagcaggccctcgagtacctagggagccgggtgaaggcagggaagcag
cagtacagcagcaggcgcagccgctcgaaggtggacgaggctcgggacatccttgccaat
gtggtcgtctgccacatccctgtcccccagtatgacttccagcagaaggtgatctacatg
gcagtgatgatgcgccgcatgattgctgcgatgctagactcgacgctgattgacgaccgg
gactactacggcaacaagcggctggagctggcaggcggcctgctggcactgctcttcgag
gacctcttcaagcgcatgaacaacgagctcaagcgcacggcggacaacacgctgtccaag
gctaacagggcgagccagtttgacgcggccaagaacctgcatgtggagatgatcagccag
ggcatggagagtgccatcagcagtggcaactggaccatccgccgcttccgcatggagcgc
aaaggggtcacacaggtcctgtcgcgcctgtccttcatcgcggctctagggatgatgact
cgcatcacctcacagttcgagaagactcgcaaggtgagcgggccgcgcgccctgcagccg
agccagtggggcatgctgtgcccggcagacacaccggagggggagagctgcggcctggtc
aaaaacctggcgttgatgacgcatgtgaccacggatgaggaggaggcccccctcgcgcgc
ctggcccacctcctgggcactcagcctgccaccctcgtctccggctttgagtacagctcc
cggggggtggcgatggtgttcctgaacggcagcatcctgggcatccaccggcggcccaag
cggctggtgaaggagttccggcggctgcggcgcgcggggcgcgtgggcgagtttgtgtcc
atcttcctgcagcaggacagcgtctacatcgcgtccgacggcggccgcgtgtgccggccc
ctcatcatctgcgaccgcggcgtcccccgcgtcacctccgctcacaccgcaaagctgaag
agcggggagtggggcttcagcgacttcctgcgcaacggcctggtggagtacctggacgtc
aacgaggagaacaatgcgctcatagccctgtatgagcgcaattgcggtgtggcgacgacg
cacctggagatagagcccttcacggtgctgggcgtggtggcgggcctgatcccctacccg
caccacaaccagtcgccgcgcaacacctaccagtgcgccatgggcaagcaggccatgggc
aacatcgcctacaaccagctcaacgtcatggacaccctgctctacctcctcgtttacccc
cagcggccgctgctgacgacgaagacgatagagctggtgggctttgacaagctgggcgcg
gggcagaacgcgacggtggcggtgatgtcatactcgggttatgacatagaggacgccatc
atcatgaaccgggcgtcgctggaccgcggctttgggcgctgcatcgtgctgcgcaagtat
ggcactgtccttaagaagcaccagaaccgctcccaggacaccgtcgtcgctgcgccgctg
ccccctggccagtcaaagccgacggggcggcacaagctgctggacgaggatggcctggct
gcgccgggggagatcgcgtctccgggggagatcctgatcaacaagcaggtgcccatgtcc
accaaggaccccctgccgcacggcatggtcagcctgccgccctccgcctacaagcctgcg
ccggtatcctggaagggccctcccggcgagtcctgcatcgtggacaaggtgctgctcacc
aacaacgacgacggccacacggtcatcaagacgctgatgaggcatacgcggcggccggag
gttggggacaagttcagcagccggcacgggcagaagggggtggtggggtcgatagtggcg
caggaggacatgcccttcagcgagcgcggcatctgccccgacctcatcatgaacccgcac
ggcttccccagccgcatgaccgtcggcaagatgctggagctcatcggctccaaggccgcc
gtccaatctggccgcttccactacggcaccgcctttggcgagtccaccggccttgccgac
aacgtcgacagcatcagcaagaccctggtggagcacgggttcagctacagcgggaaggac
cagctgaccagcggcagcagcggggagccgctggaggcgctcatctttatgggccccgtg
tactaccagaaactgaagcacatggtgctggacaagatgcacgcacgcgcaagaggaccc
cgagtggtgctcacccgccagcccaccgagggtcggtcgagggatggcggcctgcggctg
ggtgagatggagcgcgactgcctcatcggctacggcgcatccatgctcctgctggagcgc
ctcatgatctcctccgaccagttccaggtgcatgtctgcaaccactgtggcctcctgggg
tactttgatgcgaacgtgggctgcgcagtgtgccccagcacaaagtcttctgacgacatg
tccactctgaagctgccatatgcatgcaagctgctgttccaggagttacagtccatgaac
attgtcccaaggttgaaactggcagaggcctga
DBGET
integrated database retrieval system
