KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_52594
Entry
COCSUDRAFT_52594  CDS       T02914                                 
Name
(RefSeq) carotenoid isomerase
  KO
K09835  prolycopene isomerase [EC:5.2.1.13]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl00906  Carotenoid biosynthesis
csl01100  Metabolic pathways
csl01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:csl00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    COCSUDRAFT_52594
Enzymes [BR:csl01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.13  prolycopene isomerase
     COCSUDRAFT_52594
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 DAO FAD_binding_2 Thi4 FAD_oxidored Pyr_redox_2 FAD_binding_3 GIDA HI0933_like MCRA Pyr_redox Pyr_redox_3 GMC_oxred_N
Other DBs
NCBI-GeneID: 17043848
NCBI-ProteinID: XP_005650388
JGI: 52594
UniProt: I0Z5C5
LinkDB
AA seq 552 aa
MRHISCALIVGSFSSSFVSTCGTTNTYDAVVIGSGIGGLTTATQLAAKGAKVVVLEKYII
PGGSAGHFHREGYTFDVGSSMMFGMGHEGTTNLITRALAAVGKSLDTVPDPTQIHYHLPQ
SKAHPNGLEVKVWRDYDEFVEELSQRFPHEREGIKKFYGECWAVFNALNSLELKSLEEPR
YLLGEFAKHPLACLTLASYLPSNTGDVARKYIKDPELLSFIDIECYCWSTVLAEHTPMIN
AGMVFCDRHFGGINYPVGGVGRIGEELVAGLQERGSHIEYKANVKQILVEGEGESARAVG
VRLADGRVFRGKTVVSNATRWDTFERLLADEDMPEAEQLFRKRYKKSPSFVSIHMGVRAD
VLPAGTQCHHIIVEDWARMEDPLGTLFVSIPTLLDPSLSPDGTHIVHIFSPDWIDNYRGL
SPEEYERKKEAVADALVARVEAHLMGLAAATVFRETGTPRTHRRFLNREDGSYGPIPSRR
PLGMLGMPFNRTAIKGLYCVGDSTFPGQGVNAVVFSGFGCAHRVLCDQGKQPIIPVLDQG
YNAVLGAVRDRA
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgagacacatctcatgcgcactcatcgtcggcagcttttccagcagctttgtgtcaacc
tgcgggaccaccaacacatatgatgccgtagtcatcggctctggcataggaggcctcaca
acagcgacccagctcgctgcaaagggagcaaaagtggtggtcttagaaaaatatatcatt
ccagggggcagcgcagggcacttccatagagaggggtacacctttgatgtgggctcctcc
atgatgtttggcatgggccacgagggcaccacaaatctcatcacccgcgctctggccgct
gtgggcaagagcttggacaccgtgcccgaccccacacagatacactaccacctaccccaa
tccaaggcccaccccaacgggttggaggtgaaggtgtggcgggactacgatgagtttgtg
gaggagctctcgcagcgcttcccccatgagcgggagggcattaaaaagttctatggagag
tgctgggcggtgttcaatgcactgaactcgctggagctgaagagcctggaagaaccccga
tacctgctcggagagtttgccaagcacccactggcgtgcctcacccttgcatcatacttg
ccctccaacactggcgatgtggcgcgcaaatacataaaggaccccgagctgctcagcttc
atcgacatagagtgctactgctggagcaccgttctggccgagcacaccccaatgatcaat
gccggcatggttttttgtgaccggcattttggaggcatcaattacccggtgggaggagtg
ggcaggattggggaggagctggttgctggtctgcaggaaaggggcagccacatcgaatac
aaagcaaatgtgaagcagatcctggtggagggtgagggtgagtcagcgagagcggtgggg
gtgcgcctggcagacggtcgggtgttcaggggcaagaccgtggtgtccaatgccacgcga
tgggacacctttgagcgcctgctcgccgatgaagacatgcccgaggcagagcagctgttc
aggaagcggtacaagaagtcgccatcgtttgtgtcgatccacatgggcgtgcgcgcggat
gtgctgccggccgggacgcaatgccaccacatcattgtggaggactgggcgcgcatggag
gaccctctagggaccctttttgtgtccatccccacccttctggacccctcgctgtccccc
gatggcacccacatcgttcacatcttctcccccgactggatcgacaactaccgggggctg
tcaccggaggagtatgagaggaagaaggaggcggtggcggacgcgctggtggcgcgcgtg
gaggcgcacctgatgggcctggcggctgcgacggtgttccgggagacgggaacgccgcgc
acccaccgccgcttcctcaaccgcgaggacggctcctacgggcccattccctcgcgccgc
ccgctcggcatgctcggcatgccattcaaccgcaccgccatcaagggattgtactgtgtg
ggggacagcacattcccagggcagggcgtgaatgcggtggtgttttcgggctttggatgc
gcgcatagagtgctgtgcgaccagggcaagcagccgattatccccgtgctggaccagggc
tacaatgcagtcctgggtgctgtcagggacagggcctga

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