KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_52757
Entry
COCSUDRAFT_52757  CDS       T02914                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_52757
   04121 Ubiquitin system [BR:csl04121]
    COCSUDRAFT_52757
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    COCSUDRAFT_52757
Ubiquitin system [BR:csl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     COCSUDRAFT_52757
SSDB
Motif
Pfam: WD40_Prp19 WD40 Sof1 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_RFWD3 ANAPC4_WD40 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT140_1st Frtz Beta-prop_SCAP
Other DBs
NCBI-GeneID: 17043088
NCBI-ProteinID: XP_005649629
JGI: 52757
UniProt: I0Z366
LinkDB
AA seq 450 aa
MKIKTINRSASECTRERSQDVQKVHKNLDPALHPFEKAVEYTRALNAAKLDRVFAKPFIS
AFPHDDGVTCLARNPKVLNGLAAGCADGIIKLWDVPGKRSLRKLVGHTGAVKGISIAPSG
DVAVSCSTDCSVRLFRLPFAPFMSAGPVEDEASATLEFLGKHAFRGIDHHWTRNTFATAG
QQVDVWDHERSEPVSTFSWGSDSVTSVRFNPAEPDLLASAGSDRSIALYDLRSSTPIRKI
IMQTRSNSIAWNPMEAFNFTCANEDCNLYTYDMRKLKSAACIHKDFVSAVMDVDYSPTGR
EFVAGSYDRSVRLFAYNGGHSKEVYHTKRMQRVFAVRFSGDGSYVFSGSDDMNVRVWKAR
ASQQQGTMVSRELHKQAYGDALVQRYQHMPEIRRITRHRHLPVPLYKAAKLRRTMTEAED
KKQKRRVAHSKPGSVIVKPARKKRIVAELE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgaagatcaaaactatcaacagatctgcctctgagtgtactcgagaacgcagtcaagac
gttcaaaaagtccataagaaccttgatccagccctgcaccccttcgaaaaggctgtggag
tacactcgggctctgaatgctgcaaagttagacagggtctttgcaaagccattcatatca
gcctttcctcatgatgatggtgtcacatgccttgcacgaaatcccaaggtcttgaatggc
ctggcagcaggatgcgcagatggcattattaagctgtgggacgtgccgggcaagcgcagc
ttgaggaagctcgtggggcacacaggggctgtgaaggggatctccattgcaccaagcggg
gatgtggcggtctcttgctccacagactgcagcgtgcggctgttcaggctgccttttgcc
ccattcatgtcagcaggcccagtcgaggatgaggcatctgccactctggaattcctgggc
aagcatgcattcagggggatcgaccaccattggaccaggaacacctttgccactgctggc
cagcaggtggatgtgtgggaccatgagcgctcagagccagtcagcaccttctcctggggg
tctgactcagtcacaagcgtgaggttcaatccagcagagcctgacctgcttgcatcggcc
ggcagtgaccgatccatcgccctgtatgacctgcgctcttccacacccatccgcaagatt
atcatgcagactcgtagcaattcgattgcatggaatcccatggaggccttcaacttcacc
tgcgcgaacgaggactgcaacctgtacacttatgacatgcgcaagctcaagagcgctgca
tgcattcacaaggactttgtgtctgcggtgatggatgtggattactctcccactgggcgc
gaatttgtggctggcagctacgaccgctctgtgcgcctctttgcatacaatgggggccac
agcaaggaggtctaccacaccaagcggatgcagcgtgtctttgctgtgcgcttcagtggc
gatggcagctatgtcttctccggcagtgatgacatgaacgtgcgcgtctggaaggccagg
gcgagtcagcagcagggaacgatggtgtcgagggagctgcacaagcaggcatatggggac
gccctggtgcagcggtaccagcacatgccagagatccggcgcatcactcgccaccgccac
cttcctgtgcccctgtacaaggctgccaagctgcggcgcacaatgacagaggcagaggac
aagaagcagaagaggcgggtggctcacagcaagccgggctccgtcattgtcaagccggcg
cgcaagaagaggattgttgcagagcttgagtga

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