KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_53409
Entry
COCSUDRAFT_53409  CDS       T02914                                 
Name
(RefSeq) RNA polymerase Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03020  RNA polymerase
csl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    COCSUDRAFT_53409
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCSUDRAFT_53409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csl03021]
    COCSUDRAFT_53409
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_53409
Transcription machinery [BR:csl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     COCSUDRAFT_53409
  RNA polymerase III system
   RNA polymerase III
     COCSUDRAFT_53409
  RNA polymerase I system
   RNA polymerase I
     COCSUDRAFT_53409
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      COCSUDRAFT_53409
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 17041611
NCBI-ProteinID: XP_005648163
JGI: 53409
UniProt: I0YZ00
LinkDB
AA seq 133 aa
MAEEEEFGGDAGFEADFDEPEAPDEPFNEGEEDALPEGEERMEILEQQAQPSDRPRITTR
YMTKYERARILGTRALQISMNAPVMVELNGESDPLEIAMKELREKKIPFIVRRYLPDGSY
EDWTIEELIQSDR
NT seq 402 nt   +upstreamnt  +downstreamnt
atggcagaggaggaagaattcggtggagatgctgggtttgaggctgatttcgatgagcca
gaagcaccagatgagccattcaatgagggcgaggaggacgccctgccagaaggggaagag
aggatggagatcctcgagcagcaggcacaacccagcgatcggccgcgcataaccactcgg
tacatgacaaagtacgagcgagcgcgcatactgggcaccagagctcttcaaatcagcatg
aatgcacctgtcatggtggagctgaatggggagtcagatcccctggagattgccatgaag
gagctgagagagaagaagatccccttcattgtcaggcgctacctacctgatggcagttac
gaggactggaccatagaggagttgatccagtcagaccggtga

DBGET integrated database retrieval system