Coccomyxa subellipsoidea: COCSUDRAFT_53978
Help
Entry
COCSUDRAFT_53978 CDS
T02914
Name
(RefSeq) protein phosphatase 2A regulatory subunit PR55
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03015
mRNA surveillance pathway
csl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSUDRAFT_53978
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
COCSUDRAFT_53978
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csl01009
]
COCSUDRAFT_53978
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_53978
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_53978
Protein phosphatases and associated proteins [BR:
csl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
COCSUDRAFT_53978
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
COCSUDRAFT_53978
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
COCSUDRAFT_53978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
17039384
NCBI-ProteinID:
XP_005645944
JGI:
53978
UniProt:
I0YSN1
LinkDB
All DBs
AA seq
530 aa
AA seq
DB search
MDAGPGPGSLALDGSQPLNWQFLQCFGERTPGEEIQEADIISAIEFDASGQHLATGDRGG
RVVLFERVASQGRTAGMEQRQPRGRLSSFEFRYMTEFQSHEPEFDYLKSFEIEEKINKVR
WVNQPSASRMILSTNDKTIKLWKVYEKKVQHLTNYNTVEQQPSWSIPAGGVNSFSSPAKT
KLSLLADQKLAPRSPKVPELRTLRVPQVASTEVVLAARCRRKYANAHTYHVNSIALSSDQ
ETFITADDLRVNLWHLDISDQAFNVVDMKPANMDELTEVITVADFHPRHCHTFAFATSKG
AIRMADLRASALLDNSCKVYEEQAEAPGPRSFFTELLSSMSDLKFSRDGRYMLARDFMTL
KLWDVNMESSPVATYPIHEHLKPRLCDLYENDCIFDKFDCAFSGDGSHLATGTYSNCFRA
LSVEGMEEGEAGADVTLEASRDPQRKRLQTPAKSHGRFGLSRGNNAKRAALQNSGGSPAP
PPDAAAAAGGAAPDGTSLDFNTKLLHLAWHPEVNLIAAAASNSLYMYYAR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggtccaggcccaggctccctcgctctggatgggagccagccgctcaattgg
cagtttctgcagtgctttggcgagagaacaccaggagaggaaatacaggaagcggacatc
atatcagccatcgagttcgatgcaagcggccagcatcttgccacgggggatagaggggga
cgggtggttctgttcgagagggtggcctcacaagggcggacagcagggatggagcagagg
caacccagggggcgactcagctcttttgagttccgatacatgacagagttccagagccac
gagcctgagtttgactacctcaagtcctttgagattgaggagaagatcaacaaagtgcga
tgggtcaaccagccgtcagccagccgcatgattctgtcgaccaatgacaagaccataaag
ctctggaaggtctatgagaagaaggtccagcacttgacaaactacaacacagtagagcag
cagccttcatggtccataccagcagggggggtgaacagtttctcatcgccagcaaagacc
aagttgtctctgctggcagaccagaagcttgcgccgcgctccccaaaggtaccggaattg
aggactttgagggttcctcaggtggcgagcaccgaggtagtgctggcggcgcggtgccgg
aggaagtatgcgaacgcgcacacctaccacgtgaacagcatagcactgtcgagcgaccag
gagacgttcatcacggcggacgacctgcgcgtcaacctgtggcacctcgacatctccgac
caggccttcaacgtggtcgacatgaagcccgccaacatggacgagctgacagaggtgatc
acagtagctgacttccacccgcggcactgccacacgttcgcgtttgctaccagcaagggc
gccattcgaatggcagacctgcgcgccagcgccctcctggacaactcctgcaaggtctac
gaggagcaggcggaagcccccgggccgcgctctttcttcacagagctgctgtcgtccatg
tcggacctgaagttcagccgcgacgggcgctacatgctggcgcgcgacttcatgacgctc
aagctgtgggatgtcaacatggagtcctcccccgtcgccacctaccccatccacgaacac
ctcaaaccccggctgtgcgatctgtacgagaacgactgcatattcgacaagttcgactgc
gccttcagcggcgacggcagccacctggcgacgggcacctactccaactgcttccgggcg
ctgtcagtggagggcatggaggagggcgaggccggcgctgacgtcactctggaagccagc
cgggacccccagcgaaaacgcctgcagacgcccgccaagtcgcatgggaggtttgggctc
tcgaggggcaacaacgcaaagcgcgcagcgctgcagaacagcggcggcagcccagccccg
cccccggatgcggcggcggccgccggtggcgccgcacccgatggaacctcattggacttc
aacacaaagctgctgcacctcgcgtggcacccagaagtcaacctcatagcagccgcggcc
tcgaacagcctgtacatgtactacgctcgttag
DBGET
integrated database retrieval system
