Coccomyxa subellipsoidea: COCSUDRAFT_54108
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Entry
COCSUDRAFT_54108 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K06063
SNW domain-containing protein 1
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSUDRAFT_54108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csl03041
]
COCSUDRAFT_54108
Spliceosome [BR:
csl03041
]
Complex B
Other components
Prp19-related factors
COCSUDRAFT_54108
Complex C
COCSUDRAFT_54108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
17039050
NCBI-ProteinID:
XP_005645612
JGI:
54108
UniProt:
I0YRP9
LinkDB
All DBs
AA seq
573 aa
AA seq
DB search
MQGKSKLTVYVQWKMNTAISLRKTFVPRKVKDFGDGGAFPEIHVAQYPLDMGRQDKPRSD
STLAVTVGADGNVNYDAIVKQGRNKDKYIASTHDAMVPKLDRLKDSLEKPNEEEVEATMK
ETQAAMERLVNGKITAAQPKTLPAQPGAPTYIKYTPSQQGPQFNSGAGQRIIKMQDMPVD
PMEPPKFRHKKVPRGSGSPPVPVMHSPPRAVSVREQQDWKIPPCISNWKNAKGYTIPLDK
RLAADGRGLQETAINDNFAKFTEALYVAESNARQAVELRSRLQREIAAKEKESKERELRD
IAMRARMDRAGGAAPAPAAARMAGTAAGVPAAGPRDMEEDEALPPPPPRAGERESREERA
ERLRREEIREERRRERERERRLDARDAHGVKKSKLTRDRERDISEKIALGQANVRATGEA
MYDQRLFNQEGGMDSGLAADDQYNLYDKALFADRGSNLYRPNKGADTELHGGEGADEADI
RTERFKPTKGFQGVDYSTKDRSSGPVQFENDPAEADPFGLDQMLSKVNEGKKKGALDHIG
GGGAMRAGGGGGSYEDYAQGSSRSRVEFSKGRG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaagtcaaagctgacggtgtatgtacagtggaagatgaatacggctatatcg
ctgaggaaaacattcgtgccgaggaaggtgaaggatttcggggacggaggagccttcccc
gagattcatgtggcgcagtacccgctggacatgggtaggcaagacaagcccaggagcgac
tccaccctggcagtgactgtgggagcagatggcaacgtcaactatgacgccatcgtcaag
cagggccgcaacaaggacaagtatatcgccagcacgcacgacgccatggtgcccaaattg
gacaggctcaaagatagcctggagaagccgaacgaggaggaggtggaggcgacgatgaag
gagactcaggcggcgatggagcggttggtgaacggcaagatcacggccgcgcagcccaag
acgctgccggcgcagccgggcgcgccgacttacataaagtacacgccgtcgcagcagggg
ccgcagttcaacagcggcgcggggcagcgcatcatcaagatgcaggacatgcccgtcgac
cccatggagccccccaagttccgccacaagaaggtgccgcggggctccggctcgccgccg
gtgccggtgatgcactcgccgccgcgcgcggtgagcgtgcgcgagcagcaggactggaaa
atcccgccctgcatctctaactggaagaacgccaaggggtacaccattcccttggacaag
cgtctggcagccgatgggcgcggcctccaagagaccgccatcaatgacaactttgccaag
ttcaccgaggcgctctacgtcgccgagtccaatgcgcgacaggcggtggagctacggtcg
cggctgcagcgggagattgctgcaaaggagaaggagtccaaggagcgcgagctgcgagac
atcgccatgcgggcgcgcatggaccgcgccggcggcgccgccccggcaccagccgccgcg
cgcatggctggcactgccgcaggtgtgccggccgcgggaccgagggacatggaggaggac
gaggcgctgccgccgccgccgccgcgcgccggggagcgcgagagccgggaggagcgcgca
gagcggctgcgcagggaagagatcagggaggagcggaggagggaacgcgagcgcgagagg
cggctggatgcgcgcgacgcgcatggcgtgaagaagagcaagctgacgcgcgatcgcgag
cgcgacatcagcgagaagatcgctctcggccaggccaacgtgcgcgccaccggcgaggcc
atgtacgaccaacgcctcttcaaccaggagggtggcatggacagcggcctggcggcggac
gatcagtacaacctgtatgacaaagcgctcttcgccgaccgcggcagcaacctctaccgc
cccaacaagggcgccgacaccgagctgcacggcggcgagggcgcagacgaagcagacatc
cgcactgagcgcttcaaacccaccaagggcttccagggcgtggactacagcacgaaggac
cgcagcagcggccctgtgcagtttgagaacgatcctgcagaggcggaccccttcggcctg
gatcagatgctgtccaaggtgaacgagggcaagaagaagggagcgttggaccacattggc
gggggcggagccatgcgcgctggcggcggcggtggcagctacgaggattacgcgcaggga
tcctcccgctcgcgcgtggagttctccaagggccgcggctga
DBGET
integrated database retrieval system