KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_54108
Entry
COCSUDRAFT_54108  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K06063  SNW domain-containing protein 1
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSUDRAFT_54108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csl03041]
    COCSUDRAFT_54108
Spliceosome [BR:csl03041]
 Complex B
  Other components
   Prp19-related factors
    COCSUDRAFT_54108
 Complex C
    COCSUDRAFT_54108
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 17039050
NCBI-ProteinID: XP_005645612
JGI: 54108
UniProt: I0YRP9
LinkDB
AA seq 573 aa
MQGKSKLTVYVQWKMNTAISLRKTFVPRKVKDFGDGGAFPEIHVAQYPLDMGRQDKPRSD
STLAVTVGADGNVNYDAIVKQGRNKDKYIASTHDAMVPKLDRLKDSLEKPNEEEVEATMK
ETQAAMERLVNGKITAAQPKTLPAQPGAPTYIKYTPSQQGPQFNSGAGQRIIKMQDMPVD
PMEPPKFRHKKVPRGSGSPPVPVMHSPPRAVSVREQQDWKIPPCISNWKNAKGYTIPLDK
RLAADGRGLQETAINDNFAKFTEALYVAESNARQAVELRSRLQREIAAKEKESKERELRD
IAMRARMDRAGGAAPAPAAARMAGTAAGVPAAGPRDMEEDEALPPPPPRAGERESREERA
ERLRREEIREERRRERERERRLDARDAHGVKKSKLTRDRERDISEKIALGQANVRATGEA
MYDQRLFNQEGGMDSGLAADDQYNLYDKALFADRGSNLYRPNKGADTELHGGEGADEADI
RTERFKPTKGFQGVDYSTKDRSSGPVQFENDPAEADPFGLDQMLSKVNEGKKKGALDHIG
GGGAMRAGGGGGSYEDYAQGSSRSRVEFSKGRG
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgcaaggaaagtcaaagctgacggtgtatgtacagtggaagatgaatacggctatatcg
ctgaggaaaacattcgtgccgaggaaggtgaaggatttcggggacggaggagccttcccc
gagattcatgtggcgcagtacccgctggacatgggtaggcaagacaagcccaggagcgac
tccaccctggcagtgactgtgggagcagatggcaacgtcaactatgacgccatcgtcaag
cagggccgcaacaaggacaagtatatcgccagcacgcacgacgccatggtgcccaaattg
gacaggctcaaagatagcctggagaagccgaacgaggaggaggtggaggcgacgatgaag
gagactcaggcggcgatggagcggttggtgaacggcaagatcacggccgcgcagcccaag
acgctgccggcgcagccgggcgcgccgacttacataaagtacacgccgtcgcagcagggg
ccgcagttcaacagcggcgcggggcagcgcatcatcaagatgcaggacatgcccgtcgac
cccatggagccccccaagttccgccacaagaaggtgccgcggggctccggctcgccgccg
gtgccggtgatgcactcgccgccgcgcgcggtgagcgtgcgcgagcagcaggactggaaa
atcccgccctgcatctctaactggaagaacgccaaggggtacaccattcccttggacaag
cgtctggcagccgatgggcgcggcctccaagagaccgccatcaatgacaactttgccaag
ttcaccgaggcgctctacgtcgccgagtccaatgcgcgacaggcggtggagctacggtcg
cggctgcagcgggagattgctgcaaaggagaaggagtccaaggagcgcgagctgcgagac
atcgccatgcgggcgcgcatggaccgcgccggcggcgccgccccggcaccagccgccgcg
cgcatggctggcactgccgcaggtgtgccggccgcgggaccgagggacatggaggaggac
gaggcgctgccgccgccgccgccgcgcgccggggagcgcgagagccgggaggagcgcgca
gagcggctgcgcagggaagagatcagggaggagcggaggagggaacgcgagcgcgagagg
cggctggatgcgcgcgacgcgcatggcgtgaagaagagcaagctgacgcgcgatcgcgag
cgcgacatcagcgagaagatcgctctcggccaggccaacgtgcgcgccaccggcgaggcc
atgtacgaccaacgcctcttcaaccaggagggtggcatggacagcggcctggcggcggac
gatcagtacaacctgtatgacaaagcgctcttcgccgaccgcggcagcaacctctaccgc
cccaacaagggcgccgacaccgagctgcacggcggcgagggcgcagacgaagcagacatc
cgcactgagcgcttcaaacccaccaagggcttccagggcgtggactacagcacgaaggac
cgcagcagcggccctgtgcagtttgagaacgatcctgcagaggcggaccccttcggcctg
gatcagatgctgtccaaggtgaacgagggcaagaagaagggagcgttggaccacattggc
gggggcggagccatgcgcgctggcggcggcggtggcagctacgaggattacgcgcaggga
tcctcccgctcgcgcgtggagttctccaagggccgcggctga

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