Coccomyxa subellipsoidea: COCSUDRAFT_54252
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Entry
COCSUDRAFT_54252 CDS
T02914
Name
(RefSeq) hydroxymethylpyrimidine phosphate synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00730
Thiamine metabolism
csl01100
Metabolic pathways
csl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
COCSUDRAFT_54252
Enzymes [BR:
csl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
COCSUDRAFT_54252
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Ortholog
Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
17038827
NCBI-ProteinID:
XP_005645392
JGI:
54252
UniProt:
I0YR29
LinkDB
All DBs
AA seq
560 aa
AA seq
DB search
MDKCAVDPGQGELSFRQSPTFQDCFPGSEKCYREVEHDGKTLKVPFRRVHLQDDNGHFDL
YDTSGPQGVNPREGLPKIRSSWVEPREARGDKVQTQQYYAKQGIITEEMAFCAARERMDP
EFIRSEVARGRAIIPANKRHLELEPTVVGRNFLVKVNANIGNSAVSSSIEEEVEKLQWST
IWGADTAMDLSTGNNIHETREWVMRNSPVPVGTVPIYQCLEKAGGIVENITWELFRETLI
EQAEQGVDYFTIHAGVLLRYIPLTANRVTGIVSRGGSIHAKLCLLDHTENFAYMHWDEIL
DICAQYDITLSIGDGLRPGCIADANDAAQFAELKTQGELTRRAWAKDVQVMNEGPGHVPL
HKIPENMEKQLDWCSEAPFYTLGPLATDIAPAYDHITSAIGAATIGALGTALLCYVTPKE
HLGLPDRDDVKAGVIAYKIAAHAADLAKGHPYAQEWDNALSKARFEFRWYDQFHLSLDPV
TARLFHDATLPQEPAKTAHFCSMCGPKFCSMQITQDLREYAKNHQMEEDEAIQTGMAEMS
EQFKSIGAEVYLDEAVLEHA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggataaatgcgctgtggatcctgggcagggggagttgagcttccgacaaagccctaca
ttccaggattgctttcctgggagtgagaagtgctacagggaggtggagcacgacggaaag
accttgaaggtgcctttccgccgcgtgcatctgcaggatgacaacggtcacttcgacctg
tatgacaccagcggacctcagggagtcaacccaagggagggcttgcccaagatccggtcg
tcgtgggtggagcccagggaggcaaggggggacaaggtgcagacgcagcagtactatgcc
aagcagggcatcatcacagaggagatggcgttctgcgcagctcgcgaacgcatggaccca
gagttcatccgctcagaggtggctcgcggtcgtgccattatcccagcaaacaagagacac
ctcgagctggagccaacagtcgtaggccgtaacttcctggtgaaggtgaacgccaacatc
ggcaactccgccgtcagctcctcaatcgaagaggaagttgaaaagctgcagtggagcacc
atttggggcgcggacaccgccatggacctttcaaccggcaacaacatccacgagacgcgc
gagtgggtcatgcgtaattcgcccgtgccggtgggcacggtgccgatctaccagtgcctg
gagaaggcgggcggcatcgtggaaaacatcacctgggagctcttccgcgagaccctcatc
gagcaggccgagcagggagttgactacttcaccatccatgctggcgtgctgctgcgctac
attcccctgaccgccaaccgcgtcactggcattgtctcacgcggcggatccatccacgcc
aagctgtgcctgctggaccacacggagaactttgcctacatgcactgggacgagatcctg
gacatctgcgcccagtatgacatcaccctctccattggggacggcctcaggccgggctgc
atcgccgatgccaacgatgccgcgcagtttgcagagctgaagacacagggcgagctcacc
cgccgagcatgggccaaggatgtgcaggtgatgaacgagggtccgggccacgtgccgctg
cacaagatcccagagaacatggagaagcagctggactggtgcagcgaggcgcccttctac
actctggggcccctggccactgacatcgcgccggcctacgaccacatcacctccgccatt
ggagctgcgaccatcggcgccctcggcacggcgctgctgtgttacgtgacgcccaaggag
cacctgggcctgccagaccgtgacgatgtcaaggccggcgtcatcgcctacaagatcgcc
gcccacgcggccgaccttgcaaagggccacccatatgcccaggagtgggacaatgctctt
tccaaggcgcgcttcgagttcagatggtatgaccagttccacctgtcgctggaccctgtc
actgcgcgtctgttccacgatgccacgctgccccaggagcccgccaagaccgcccacttc
tgctccatgtgtggccccaagttctgctccatgcagatcacacaggacctgcgagagtat
gctaagaaccaccagatggaagaggacgaagccatccagactggcatggcggagatgtcg
gagcagttcaagagcatcggagcagaggtgtacctggatgaagccgtgctggagcatgcc
tga
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