Coccomyxa subellipsoidea: COCSUDRAFT_54370
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Entry
COCSUDRAFT_54370 CDS
T02914
Name
(RefSeq) parvulin-type peptidyl-prolyl cis-trans isomerase
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCSUDRAFT_54370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_54370
03110 Chaperones and folding catalysts [BR:
csl03110
]
COCSUDRAFT_54370
Enzymes [BR:
csl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
COCSUDRAFT_54370
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
COCSUDRAFT_54370
Chaperones and folding catalysts [BR:
csl03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
COCSUDRAFT_54370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
FHA
Yop-YscD_cpl
Rotamase_2
Motif
Other DBs
NCBI-GeneID:
17038587
NCBI-ProteinID:
XP_005645155
JGI:
54370
UniProt:
I0YQE2
LinkDB
All DBs
AA seq
245 aa
AA seq
DB search
MAFVPPSWASQPSRTASLKVKSQSGELIESFPIDTKAFYLFGRIPETSDITLSDSSCSRS
HAALVHHEDGRLFLIDLQSSQGTHLDGRRIPPNKPTQISNASVLTFGNLTQQYVVECETA
GTKRKKPDNENMDKGTVRASHLLVKHRDSRRPSSWKEPTVTRSKEEALDKIRGFQQQLAD
GSADFATLATAESHCSSARRGGDLGEFGPGQMQKPFEDATYALKVGELSQPVFTDSGVHL
ILRTA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtgcctccaagttgggcatcgcaaccatcaagaactgctagtctaaaagtg
aaatcacagagcggtgaattgatagaaagctttcctatcgacaccaaagcgttttacctg
tttgggcgcattcctgagacctctgacatcactctgagtgacagctcttgctcgcgttca
cacgccgctctggtgcatcacgaggacggacggctgttcctcattgatctacaatcgtcg
caaggcacacacttggacgggcgcagaattccaccaaacaagccaacacagatctccaac
gcaagcgtcttgacctttgggaacctaactcagcagtacgtggttgagtgtgagacagcc
ggaacaaagcggaaaaagccagataacgagaacatggacaagggcacagttagagcatcg
catctcctggtcaagcacagggattcgcggcggccgtcatcgtggaaggagccgacggtg
acgcgcagcaaggaggaggcgctggacaagatccgcggctttcagcagcagctggcagac
ggcagcgccgattttgcgacgctggcgactgccgagtcgcactgcagcagcgcccgccgc
ggcggcgacctgggagagttcggccctgggcagatgcagaagccctttgaggacgccact
tacgccctcaaggtcggggaactgagccagccggtgttcacagactctggagtgcacctc
atcctgcggactgcttga
DBGET
integrated database retrieval system
