KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_54434
Entry
COCSUDRAFT_54434  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K03505  DNA polymerase delta subunit 4
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03030  DNA replication
csl03410  Base excision repair
csl03420  Nucleotide excision repair
csl03430  Mismatch repair
csl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCSUDRAFT_54434
   03410 Base excision repair
    COCSUDRAFT_54434
   03420 Nucleotide excision repair
    COCSUDRAFT_54434
   03430 Mismatch repair
    COCSUDRAFT_54434
   03440 Homologous recombination
    COCSUDRAFT_54434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csl03032]
    COCSUDRAFT_54434
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_54434
DNA replication proteins [BR:csl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    COCSUDRAFT_54434
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      COCSUDRAFT_54434
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     COCSUDRAFT_54434
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 17038201
NCBI-ProteinID: XP_005644769
JGI: 54434
UniProt: I0YPA6
LinkDB
AA seq 119 aa
MMTGNSKINYRQSKAYLDPQPQRSKLKTTRSSSSQPDVSTGVEARSSTSGEHADLTAASE
ALKGFDLAMKYGPCTGLTRLARWHRAENLGLQPPLDIKRILEGLPENHALQNNIWHGRV
NT seq 360 nt   +upstreamnt  +downstreamnt
atgatgactggaaacagtaaaatcaactacaggcagtcgaaggcttatctcgacccccag
ccccaacgatctaagctgaaaacgaccaggagctcttcgtcgcaacctgatgtcagcaca
ggcgtagaagctcgttccagcacttctggggaacatgcagacctcacggccgcgtccgaa
gctctcaaaggcttcgacttggccatgaagtatggaccttgcactggactgacacgactt
gcaaggtggcacagagccgagaatcttggcctgcagccacccctggacatcaagcgcatc
ctggagggactgccagagaaccatgctctgcaaaacaatatctggcatgggagggtctga

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