Coccomyxa subellipsoidea: COCSUDRAFT_54483 Help Entry COCSUDRAFT_54483  CDS       T02914                                  Name (RefSeq) chaperonin 60A   KO K04077   chaperonin GroEL [EC:5.6.1.7] Organism csl  Coccomyxa subellipsoidea Pathway csl03018   RNA degradation Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     COCSUDRAFT_54483  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csl03019]     COCSUDRAFT_54483    03110 Chaperones and folding catalysts [BR:csl03110]     COCSUDRAFT_54483    03029 Mitochondrial biogenesis [BR:csl03029]     COCSUDRAFT_54483   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:csl04147]     COCSUDRAFT_54483 Enzymes [BR:csl01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.1  Enzymes altering polypeptide conformation or assembly     5.6.1.7  chaperonin ATPase      COCSUDRAFT_54483 Messenger RNA biogenesis [BR:csl03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Chaperones      COCSUDRAFT_54483 Chaperones and folding catalysts [BR:csl03110]  Heat shock proteins   HSP60 / Chaperonin    COCSUDRAFT_54483 Mitochondrial biogenesis [BR:csl03029]  Mitochondrial protein import machinery   Matrix    Other matrix factors     COCSUDRAFT_54483 Exosome [BR:csl04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    COCSUDRAFT_54483   Exosomal proteins of other body fluids (saliva and urine)    COCSUDRAFT_54483   Exosomal proteins of breast cancer cells    COCSUDRAFT_54483   Exosomal proteins of colorectal cancer cells    COCSUDRAFT_54483   Exosomal proteins of bladder cancer cells    COCSUDRAFT_54483 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cpn60_TCP1 Motif Other DBs NCBI-GeneID:  17037839 NCBI-ProteinID:  XP_005644409 JGI:  54483 UniProt:  I0YN96 LinkDB All DBs AA seq 592 aa AA seqDB search MQASAMSGRSAFLAGKPLVPLAQAKFQRGGRRVHVVLSSAKEIIFDNESRRKMQIGINKL ADAVGVTLGPRGRNVVLEQSYGMPQVINDGVSIARAIELEDPIENAGAQLIKEVAGRTND AAGDGTTTASVLARELIHYGLQAVTAGSNPITLKKGIDKTCDFLVAKLKEVSRPVKGTED IKSVASISAGNDVAIGALIADALEKVGADGVLSIETGNGLETTVEVQEGMQVDRGYVSPQ FITNQEKMLVEYENARILITDQKLETIKDVLPVLEQVTRVNQPLVIIAEDVTGEALATLV VNKLRGVLNAVAIKAPGFGERRKSLLQDIAIVTGAEYVAKDLGMKVETTGIESLGTARKI TIGNNWCTIVADAANREEIALRIAQIKKELSETDSVYDTEKLSERIAKLAGGVAVIKVGA ATEVELEDRQLRIEDAKNATFAAVEEGIVPGGGAALLHLSEFLPKFRDTLTDGEEKLGCD IVGKALRAPVRLIASNAGVEGDVIIEKLLGQPFEIGYNAMEDRIEDLMVAGVLDPAKVTR SGLQNACGIAGIMLTTQAIMVEKRDPARAAAMANPVNNPGFGASGMPAGLTM NT seq 1779 nt NT seq  +upstreamnt  +downstreamnt atgcaggcgtctgcgatgtctggacgcagtgccttcctcgctggaaagcctctggtgcct ttggcccaggccaagttccagaggggtggcaggagagtccatgtggttctctcctccgca aaggagattatctttgacaacgagtcacggaggaagatgcagatcggcatcaacaaacta gcagatgcagtgggagtgaccctcggccccagggggaggaacgtggtgttggagcagtca tatggcatgccccaggtcatcaacgatggagtgtccatcgctcgtgccatcgagcttgag gaccctatcgagaatgcaggggcccagcttatcaaggaggtagctggccggacaaacgat gcagcgggtgacggcaccaccacagcctctgtgctggcgcgggagctgatccactatggg ctgcaggcggtgacggcaggctcgaatcccataacgctgaagaagggcattgacaagacg tgcgacttcctggtggccaagctcaaggaggtgtcgcgcccggtcaagggtaccgaggac atcaagagcgtggcgagcatttctgccggcaatgacgtggcgatcggggcgctgatcgcg gacgctctggagaaggtgggagccgacggcgttctctccatcgagacagggaacggcctt gagaccaccgtggaggtgcaggagggcatgcaggtcgatcgcggctacgtctcaccccag ttcatcaccaaccaggagaagatgctggtggagtatgagaatgcgcgcatcctgatcacg gaccagaagctggagaccatcaaggacgtgctgcccgtgctggagcaggtcacgcgcgtc aaccagcccctcgtcatcattgccgaggacgtcaccggcgaggcgctggcgactctggtg gtgaacaagctgcgcggcgtgctcaacgcggtcgccattaaggcgcccggctttggcgag cggcgcaagtcgctgttgcaggacattgccatcgtgaccggcgctgaatacgttgccaag gacctgggcatgaaggtggagaccaccggcatcgagtccctgggcactgctcgcaagatc acaatcggcaacaactggtgcacgattgtggcggacgcggcgaacagggaagagatcgct ctgcgcatcgcccagattaagaaagagctctcagagacagactcggtgtatgacaccgag aagctgtccgagcgcatcgccaagctggcgggcggcgtggctgtcatcaaggtgggagct gcgacagaggtcgagctggaggacaggcagctgcggattgaggacgccaagaacgccaca ttcgcggcggtcgaggagggcattgtgccggggggcggcgcggctctgctgcatctctct gagttcctgcccaagttcagggacaccctcacagacggcgaggagaagctgggatgtgac attgtgggcaaggctttgcgcgcgccggtgcggctgattgcttccaacgctggggtggag ggtgacgtcatcatcgagaagctgctggggcagcccttcgagatcggctacaacgcgatg gaggaccggatagaggacctgatggtggcgggtgtgctggatcctgccaaggtgactcgc agcggactccaaaacgcatgcggcattgccggaatcatgctcaccacacaggcgatcatg gtggagaagagggacccagccagggcggcggccatggccaacccagtgaacaaccccggc tttggcgccagcggcatgcccgccggcctcaccatgtga

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