Coccomyxa subellipsoidea: COCSUDRAFT_54984
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Entry
COCSUDRAFT_54984 CDS
T02914
Name
(RefSeq) eukaryotic release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSUDRAFT_54984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_54984
03012 Translation factors [BR:
csl03012
]
COCSUDRAFT_54984
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
COCSUDRAFT_54984
Translation factors [BR:
csl03012
]
Eukaryotic type
Release factors
COCSUDRAFT_54984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
17036151
NCBI-ProteinID:
XP_005642788
JGI:
54984
UniProt:
I0YIM5
LinkDB
All DBs
AA seq
436 aa
AA seq
DB search
MGDEGEKQVEIWKVKRLIKALEAARGNGTSMISLIMPPKDQVSRAQKMLGDEFGTASNIK
NRVNRQSVLGAITSAQQRLKLYNKVPPNGLVVYTGTVVTDDGKEKKLNIDFEPFKPINTS
LYLCDNKFHTEALNELLESDSKYGFIVMDGNGSLFGTLSGNTREVMHKFTVDLPKKHGRG
GQSALRFARLRLEKRHNYVRKVAETAVQFFISGDRPNVAGLVLAGSAEFKTELSDSDMFD
QRLKAAVLAVVDVSYGGENGFNQAIELSADTLANVKFVQEKRLISKFFDEISQDTGKFVF
GVADTLQCLDMGAVETLIVWENLDVNRITLRNTVTGDENIVTLSKEQEANEAHYKDKETG
AELEVIEKMPLLEWLANSYKKFGCQLEFVTNKSQEGSQFCRGFGGIGGLLRYSVDLSQFE
AYEEDDGPEWNSDEDI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgaaggcgagaagcaagtagaaatatggaaggtcaagcggcttatcaaagct
ttggaagcggccagaggcaacggaacgtccatgatcagtttgatcatgcctccaaaggat
caggtctctcgggctcagaaaatgcttggagacgagtttggcacagcgtccaatattaag
aacagggtcaatcgacaatccgtgctgggagccatcacatcagcacagcagagattaaag
ctctacaacaaggtacctcccaatgggctggtggtgtacactggtactgtggtgacagac
gatggcaaggagaagaagctcaatatcgactttgagcccttcaagcccatcaacacatcc
ctgtacctgtgcgacaacaaattccacacagaggccctcaacgagctgctcgagtctgac
agcaagtacgggttcattgtgatggacgggaacgggtcgctgtttggaacgctaagcggc
aacacgcgggaggtgatgcacaagttcacggtggacctgcccaagaagcacgggcgcggt
gggcagtccgcgctgcgtttcgcgcgtctgcggctggaaaagcgccacaactacgtgcga
aaggtggcggagacggcggtgcagttcttcatctcaggggacaggccgaatgtggcgggg
ctggtgctggcggggtctgcagagttcaagacagagctcagtgactccgacatgttcgac
cagcggctcaaagcagctgtgcttgctgttgttgatgtctcctatggtggagagaacggg
ttcaatcaggcgatcgagctcagtgcagacaccctggcgaatgtcaaattcgtccaggag
aagaggctcatctcaaagttctttgacgaaatcagtcaggatacaggcaagtttgttttt
ggtgtggcggacaccctgcagtgcctggacatgggcgcagtggagacactcattgtatgg
gagaacttggatgtgaatcgcatcacattgaggaacacggtgacgggtgacgagaacatt
gtgacgctcagcaaggagcaggaggccaacgaggcccactacaaggacaaggagacgggt
gcagagctggaggtcatcgagaaaatgcccctgctcgagtggctggcgaacagctacaag
aagttcggctgccagctcgagtttgtcaccaacaagtcgcaggagggcagtcaattctgc
agaggctttggtggcatcgggggactgctgcggtactctgtggacctgagccaatttgag
gcctatgaggaagatgacggccctgagtggaacagtgatgaggacatctga
DBGET
integrated database retrieval system
