Coccomyxa subellipsoidea: COCSUDRAFT_55142
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Entry
COCSUDRAFT_55142 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K08494
novel plant SNARE
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_55142
Membrane trafficking [BR:
csl04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
COCSUDRAFT_55142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
Mobilization_B
DUF5089
V-SNARE
DUF4342
Motif
Other DBs
NCBI-GeneID:
17045133
NCBI-ProteinID:
XP_005651662
JGI:
55142
UniProt:
I0Z8Z9
LinkDB
All DBs
AA seq
239 aa
AA seq
DB search
MSTAGKYEQEAKLTAIYAELRDGFKKADGISDLNKQQSLLKDLTSKMQEAKVLIKEFEQE
ARTDGISAAELANRKKAMVQELNNFISMKKERSADLDARKELVAGGSPSKAPQTINEMSA
QQLMERGRKEMKAQDESLLRAQKIVESTVDIGSKTAETLHAQGQQMERVLDNLEEMRFDI
KKGGQVIRDITRGLATDKCIMMLLMFVVIIIVVIIACKLAGVGKVSIPQPNFGLELLQQ
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggcgggaaagtatgagcaggaagcgaagctcacagcaatttatgctgagctc
cgagatggtttcaaaaaagcggacggcatctcggacctcaacaagcagcagtccctcctc
aaggacctcacatccaaaatgcaggaggcgaaagtgctcataaaggaattcgaacaagag
gccagaacggatggcatttccgccgcagagctggccaatcgaaagaaggcgatggtgcag
gagctgaacaacttcatcagcatgaagaaggagcgcagcgctgacctggacgccaggaag
gagctcgtcgccggcggcagcccatccaaagccccacagaccatcaacgagatgtcggca
cagcagctgatggagcgcggccgcaaggagatgaaggcgcaggacgagtcgctgctgcgc
gcgcagaagatcgtggaatcgacggtcgatatcggctccaagacggccgaaacgctgcac
gcgcaggggcagcagatggagcgcgtgcttgacaacctcgaagagatgcgcttcgacatc
aagaaaggaggacaggtcatccgcgacatcactcgcggactcgccaccgacaagtgcatc
atgatgctgctgatgtttgtggtgatcatcatagtggtcatcattgcgtgcaagcttgca
ggcgtcggcaaggtctccattccccagcccaacttcgggctggagctgttgcagcagtga
DBGET
integrated database retrieval system
